Tetra-nucleotide Imperfect Repeats of Gossypium gossypioides chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_017894 | AAGT | 3 | 1147 | 1157 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 38680081 |
| 2 | NC_017894 | ATCT | 3 | 4663 | 4674 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 3 | NC_017894 | TTCA | 3 | 4926 | 4937 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 4 | NC_017894 | AAAT | 4 | 6449 | 6464 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 5 | NC_017894 | ATAG | 3 | 8363 | 8374 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 6 | NC_017894 | ATTT | 3 | 8628 | 8638 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 7 | NC_017894 | AATC | 3 | 8715 | 8725 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 8 | NC_017894 | TCTA | 3 | 13466 | 13477 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 9 | NC_017894 | AAAT | 3 | 14114 | 14125 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 10 | NC_017894 | TTTA | 4 | 14722 | 14736 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 11 | NC_017894 | TAAA | 3 | 16082 | 16092 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_017894 | TTTA | 5 | 23356 | 23375 | 20 | 25 % | 75 % | 0 % | 0 % | 10 % | 38680082 |
| 13 | NC_017894 | GATA | 3 | 27199 | 27209 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 38680082 |
| 14 | NC_017894 | CTAA | 3 | 29050 | 29061 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 15 | NC_017894 | GAAA | 3 | 31394 | 31405 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 16 | NC_017894 | ATCA | 3 | 31594 | 31604 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 17 | NC_017894 | TTCA | 4 | 32444 | 32459 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 18 | NC_017894 | AATA | 3 | 33472 | 33483 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 19 | NC_017894 | TCTT | 3 | 33550 | 33562 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 20 | NC_017894 | GTTT | 3 | 33888 | 33899 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 21 | NC_017894 | GAAA | 3 | 35883 | 35894 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 38680083 |
| 22 | NC_017894 | TTGC | 3 | 36284 | 36294 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 38680083 |
| 23 | NC_017894 | ATCT | 3 | 37320 | 37331 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 24 | NC_017894 | AAAT | 3 | 37384 | 37395 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_017894 | TGAA | 4 | 37936 | 37950 | 15 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 26 | NC_017894 | AAAT | 3 | 38315 | 38327 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 27 | NC_017894 | GATC | 3 | 38912 | 38922 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 28 | NC_017894 | AATG | 3 | 42259 | 42270 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 38680083 |
| 29 | NC_017894 | ATCT | 4 | 43983 | 43998 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 30 | NC_017894 | GTAA | 3 | 46735 | 46745 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 38680083 |
| 31 | NC_017894 | AAAG | 3 | 49601 | 49612 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 32 | NC_017894 | CATA | 3 | 51002 | 51012 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 33 | NC_017894 | ACAT | 3 | 51298 | 51308 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 34 | NC_017894 | CAAA | 3 | 52425 | 52436 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 38680084 |
| 35 | NC_017894 | GTCT | 3 | 53034 | 53045 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 38680084 |
| 36 | NC_017894 | GATT | 3 | 53837 | 53848 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 37 | NC_017894 | ATTT | 3 | 54149 | 54159 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 38 | NC_017894 | AGAA | 3 | 54734 | 54745 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 39 | NC_017894 | ATTT | 3 | 58159 | 58169 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 40 | NC_017894 | ATTT | 9 | 58316 | 58352 | 37 | 25 % | 75 % | 0 % | 0 % | 10 % | Non-Coding |
| 41 | NC_017894 | AAAG | 3 | 60637 | 60647 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 42 | NC_017894 | TAGT | 3 | 62383 | 62394 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 43 | NC_017894 | TCTA | 3 | 63424 | 63435 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 44 | NC_017894 | CTTT | 3 | 65891 | 65902 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 45 | NC_017894 | TTTC | 3 | 67250 | 67260 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 46 | NC_017894 | TACA | 3 | 71866 | 71877 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 38680085 |
| 47 | NC_017894 | TAAA | 3 | 71891 | 71902 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 38680085 |
| 48 | NC_017894 | TCAT | 3 | 73452 | 73463 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 49 | NC_017894 | GAAC | 3 | 73795 | 73806 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | Non-Coding |
| 50 | NC_017894 | TTTA | 3 | 74731 | 74742 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 38680088 |
| 51 | NC_017894 | TTGA | 3 | 81613 | 81625 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 38680088 |
| 52 | NC_017894 | TTTC | 3 | 82547 | 82557 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 38680088 |
| 53 | NC_017894 | TTTA | 3 | 83913 | 83924 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 38680088 |
| 54 | NC_017894 | TTTC | 3 | 86842 | 86853 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 38680088 |
| 55 | NC_017894 | ATTT | 3 | 87187 | 87198 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 38680088 |
| 56 | NC_017894 | AATT | 3 | 87687 | 87697 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 38680088 |
| 57 | NC_017894 | TTAT | 3 | 87824 | 87835 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 38680088 |
| 58 | NC_017894 | AATT | 3 | 88466 | 88477 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 38680088 |
| 59 | NC_017894 | TTCT | 3 | 92477 | 92487 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 38680088 |
| 60 | NC_017894 | ATCG | 3 | 93235 | 93247 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 38680088 |
| 61 | NC_017894 | CTTT | 3 | 93664 | 93674 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 38680088 |
| 62 | NC_017894 | TGAT | 3 | 95546 | 95558 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 38680088 |
| 63 | NC_017894 | AATA | 3 | 96429 | 96441 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 38680088 |
| 64 | NC_017894 | TCTA | 3 | 108135 | 108146 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 38680090 |
| 65 | NC_017894 | AAGG | 3 | 108284 | 108294 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 38680090 |
| 66 | NC_017894 | GAGG | 3 | 111013 | 111024 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 38680090 |
| 67 | NC_017894 | AGGT | 3 | 111225 | 111236 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 38680090 |
| 68 | NC_017894 | TAAG | 3 | 112345 | 112355 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 38680090 |
| 69 | NC_017894 | TATT | 3 | 113440 | 113450 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 38680090 |
| 70 | NC_017894 | TCTT | 3 | 116514 | 116525 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 38680090 |
| 71 | NC_017894 | AGTT | 3 | 117964 | 117974 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 38680090 |
| 72 | NC_017894 | GAAT | 3 | 118122 | 118133 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 38680090 |
| 73 | NC_017894 | ATTA | 3 | 118285 | 118296 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 38680090 |
| 74 | NC_017894 | TTAT | 3 | 123318 | 123328 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 38680090 |
| 75 | NC_017894 | AAAG | 3 | 124077 | 124088 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 38680090 |
| 76 | NC_017894 | CAAA | 3 | 124897 | 124907 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 38680090 |
| 77 | NC_017894 | ATCA | 3 | 126143 | 126154 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 38680090 |
| 78 | NC_017894 | TCTT | 3 | 128375 | 128385 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 38680090 |
| 79 | NC_017894 | TGAA | 4 | 129935 | 129950 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | 38680090 |
| 80 | NC_017894 | TTAA | 3 | 130460 | 130470 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 38680090 |
| 81 | NC_017894 | AACA | 3 | 130997 | 131008 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 38680090 |
| 82 | NC_017894 | ATTT | 3 | 132714 | 132724 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 38680090 |
| 83 | NC_017894 | ATTT | 3 | 133693 | 133705 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 38680090 |
| 84 | NC_017894 | TTTA | 3 | 134227 | 134238 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 38680090 |
| 85 | NC_017894 | AATA | 3 | 135313 | 135323 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 38680090 |
| 86 | NC_017894 | CTTA | 3 | 136408 | 136418 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 38680090 |
| 87 | NC_017894 | CCTT | 3 | 140469 | 140479 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 38680090 |
| 88 | NC_017894 | GGAT | 3 | 141012 | 141023 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 38680090 |
| 89 | NC_017894 | TTTC | 3 | 149580 | 149591 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 90 | NC_017894 | ATCA | 3 | 153247 | 153259 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 38680089 |
| 91 | NC_017894 | TGAT | 3 | 153342 | 153354 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 38680089 |
| 92 | NC_017894 | AAAG | 3 | 155089 | 155099 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 38680089 |
| 93 | NC_017894 | CGAT | 3 | 155516 | 155528 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 38680089 |
| 94 | NC_017894 | TATT | 3 | 156148 | 156159 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 38680089 |