Penta-nucleotide Imperfect Repeats of Oryza rufipogon chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_017835 | TCTTT | 3 | 2574 | 2588 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 38679915 |
| 2 | NC_017835 | TCTCT | 3 | 4651 | 4664 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | Non-Coding |
| 3 | NC_017835 | TTTAA | 3 | 5921 | 5934 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
| 4 | NC_017835 | TTGAC | 3 | 6455 | 6469 | 15 | 20 % | 40 % | 20 % | 20 % | 6 % | Non-Coding |
| 5 | NC_017835 | ACAAA | 3 | 11441 | 11454 | 14 | 80 % | 0 % | 0 % | 20 % | 7 % | Non-Coding |
| 6 | NC_017835 | CGTAG | 3 | 12330 | 12343 | 14 | 20 % | 20 % | 40 % | 20 % | 7 % | Non-Coding |
| 7 | NC_017835 | AATCT | 3 | 13241 | 13254 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |
| 8 | NC_017835 | AATAG | 3 | 17384 | 17397 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | Non-Coding |
| 9 | NC_017835 | GAAAA | 3 | 29498 | 29511 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | Non-Coding |
| 10 | NC_017835 | TTTTG | 3 | 46156 | 46169 | 14 | 0 % | 80 % | 20 % | 0 % | 7 % | Non-Coding |
| 11 | NC_017835 | TTGAA | 3 | 63621 | 63635 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 38679918 |
| 12 | NC_017835 | AGAAA | 3 | 76224 | 76238 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
| 13 | NC_017835 | AGAAT | 3 | 80995 | 81008 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | Non-Coding |
| 14 | NC_017835 | GAAAA | 3 | 127307 | 127322 | 16 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
| 15 | NC_017835 | ATTCT | 3 | 134131 | 134144 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |