Tetra-nucleotide Imperfect Repeats of Phalaenopsis equestris chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_017609 | TTCT | 3 | 2883 | 2893 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 38515345 |
| 2 | NC_017609 | TATG | 3 | 3349 | 3360 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 3 | NC_017609 | GATG | 3 | 6016 | 6026 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 38515350 |
| 4 | NC_017609 | TTAT | 3 | 6586 | 6597 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 5 | NC_017609 | ATTT | 3 | 6655 | 6666 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 6 | NC_017609 | GTTT | 3 | 6780 | 6791 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 7 | NC_017609 | AATT | 3 | 8798 | 8808 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 8 | NC_017609 | CTAT | 3 | 10787 | 10798 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 9 | NC_017609 | TAGA | 3 | 11082 | 11092 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 38515345 |
| 10 | NC_017609 | GTCT | 3 | 11996 | 12007 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 38515345 |
| 11 | NC_017609 | AATA | 3 | 13910 | 13921 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 38515345 |
| 12 | NC_017609 | CATA | 3 | 15116 | 15127 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 13 | NC_017609 | TTTC | 3 | 17113 | 17124 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 14 | NC_017609 | TCAA | 3 | 17428 | 17439 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 38515350 |
| 15 | NC_017609 | ATTT | 3 | 21512 | 21522 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 16 | NC_017609 | AAAT | 3 | 23243 | 23254 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 38515350 |
| 17 | NC_017609 | GAAA | 3 | 26957 | 26969 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 38515349 |
| 18 | NC_017609 | AGCT | 3 | 28184 | 28195 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 19 | NC_017609 | AAGT | 3 | 29484 | 29494 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 20 | NC_017609 | TCAT | 3 | 29982 | 29993 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 21 | NC_017609 | TTTC | 3 | 31102 | 31112 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 22 | NC_017609 | TCCT | 3 | 31422 | 31432 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 23 | NC_017609 | ACAA | 3 | 31748 | 31759 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 24 | NC_017609 | AAAG | 3 | 32076 | 32087 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 25 | NC_017609 | TAAA | 3 | 33228 | 33239 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 26 | NC_017609 | ATTT | 3 | 33965 | 33976 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_017609 | TATT | 3 | 34229 | 34240 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 28 | NC_017609 | GAAA | 3 | 36020 | 36031 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 38515347 |
| 29 | NC_017609 | AAGA | 3 | 41359 | 41370 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 38515346 |
| 30 | NC_017609 | AATG | 3 | 41758 | 41769 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 38515346 |
| 31 | NC_017609 | TATT | 3 | 43706 | 43717 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 32 | NC_017609 | AAGA | 3 | 44476 | 44486 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 38515352 |
| 33 | NC_017609 | GTAA | 3 | 44580 | 44590 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 38515352 |
| 34 | NC_017609 | CTTT | 3 | 44825 | 44836 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 38515352 |
| 35 | NC_017609 | AATC | 3 | 46230 | 46241 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 36 | NC_017609 | CTTT | 3 | 47745 | 47755 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 37 | NC_017609 | TTGA | 3 | 48607 | 48619 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 38 | NC_017609 | TTAT | 3 | 51731 | 51742 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 39 | NC_017609 | TTAT | 5 | 55782 | 55802 | 21 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 40 | NC_017609 | TTCA | 3 | 55978 | 55988 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 41 | NC_017609 | TCAT | 3 | 60149 | 60159 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 42 | NC_017609 | AAAG | 3 | 60427 | 60438 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 43 | NC_017609 | TTAA | 3 | 60995 | 61006 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 44 | NC_017609 | GAAA | 3 | 63416 | 63428 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 38515346 |
| 45 | NC_017609 | ACTT | 3 | 64147 | 64157 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 46 | NC_017609 | ATTA | 4 | 68518 | 68532 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 47 | NC_017609 | GAAA | 3 | 68897 | 68908 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 38515349 |
| 48 | NC_017609 | TCTT | 3 | 69518 | 69529 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 49 | NC_017609 | TTTC | 3 | 70083 | 70095 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 50 | NC_017609 | AAAT | 3 | 70228 | 70238 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 51 | NC_017609 | AAAG | 3 | 70251 | 70261 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 52 | NC_017609 | TAGA | 3 | 70671 | 70681 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 53 | NC_017609 | TATC | 3 | 71343 | 71354 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 38515350 |
| 54 | NC_017609 | TTTA | 3 | 71592 | 71603 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 38515350 |
| 55 | NC_017609 | ATCA | 3 | 73602 | 73614 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 38515350 |
| 56 | NC_017609 | ATTC | 3 | 74372 | 74383 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 38515350 |
| 57 | NC_017609 | ATTT | 3 | 75509 | 75520 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 38515350 |
| 58 | NC_017609 | ATCT | 3 | 75615 | 75625 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 38515350 |
| 59 | NC_017609 | TATT | 3 | 78145 | 78155 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 38515350 |
| 60 | NC_017609 | AATG | 3 | 78825 | 78835 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 38515350 |
| 61 | NC_017609 | AATC | 4 | 80067 | 80082 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | 38515350 |
| 62 | NC_017609 | TTTC | 3 | 81864 | 81876 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 38515350 |
| 63 | NC_017609 | GAAA | 3 | 83024 | 83034 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 38515350 |
| 64 | NC_017609 | TAAA | 3 | 83910 | 83922 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 38515350 |
| 65 | NC_017609 | TTCT | 3 | 84465 | 84476 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 38515350 |
| 66 | NC_017609 | AATG | 3 | 86584 | 86594 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 38515350 |
| 67 | NC_017609 | GCAA | 3 | 89047 | 89057 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 38515350 |
| 68 | NC_017609 | TTCT | 3 | 90321 | 90331 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 38515350 |
| 69 | NC_017609 | GAAA | 3 | 90445 | 90457 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 38515350 |
| 70 | NC_017609 | TGAT | 3 | 93357 | 93369 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 38515350 |
| 71 | NC_017609 | TTTC | 3 | 94302 | 94313 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 38515350 |
| 72 | NC_017609 | TCTA | 3 | 96446 | 96457 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 38515350 |
| 73 | NC_017609 | TCTA | 3 | 105772 | 105783 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 38515350 |
| 74 | NC_017609 | GAGG | 3 | 108621 | 108632 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 38515350 |
| 75 | NC_017609 | AGGT | 3 | 108833 | 108844 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 38515350 |
| 76 | NC_017609 | TAAG | 3 | 109953 | 109963 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 38515350 |
| 77 | NC_017609 | ATGA | 3 | 111379 | 111390 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 38515350 |
| 78 | NC_017609 | TTTA | 3 | 111812 | 111824 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 38515350 |
| 79 | NC_017609 | ATTG | 3 | 111952 | 111962 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 38515350 |
| 80 | NC_017609 | ATGA | 3 | 115927 | 115938 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 38515350 |
| 81 | NC_017609 | GAAA | 5 | 116341 | 116360 | 20 | 75 % | 0 % | 25 % | 0 % | 10 % | 38515350 |
| 82 | NC_017609 | ATAA | 3 | 116361 | 116372 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 38515350 |
| 83 | NC_017609 | AATT | 3 | 117043 | 117054 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 38515350 |
| 84 | NC_017609 | TATT | 3 | 118037 | 118047 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 38515350 |
| 85 | NC_017609 | AATT | 3 | 118829 | 118839 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 38515350 |
| 86 | NC_017609 | TTAT | 3 | 119135 | 119146 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 38515350 |
| 87 | NC_017609 | GAAT | 3 | 119233 | 119244 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 38515350 |
| 88 | NC_017609 | CATT | 3 | 119395 | 119406 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 38515350 |
| 89 | NC_017609 | TCTT | 3 | 120058 | 120069 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 38515350 |
| 90 | NC_017609 | AAAT | 3 | 120195 | 120205 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 38515350 |
| 91 | NC_017609 | TCTT | 3 | 121459 | 121469 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 38515350 |
| 92 | NC_017609 | TTTC | 3 | 122085 | 122097 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 38515350 |
| 93 | NC_017609 | ATTT | 3 | 123063 | 123073 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 38515350 |
| 94 | NC_017609 | CTTA | 3 | 124964 | 124974 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 38515350 |
| 95 | NC_017609 | TAGA | 3 | 138470 | 138481 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 96 | NC_017609 | TGAA | 3 | 140613 | 140624 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 38515351 |
| 97 | NC_017609 | ATCA | 3 | 141558 | 141570 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 38515351 |
| 98 | NC_017609 | TGAT | 3 | 141653 | 141665 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 38515351 |
| 99 | NC_017609 | TTGC | 3 | 145870 | 145880 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 38515351 |
| 100 | NC_017609 | CATT | 3 | 148333 | 148343 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |