Tetra-nucleotide Imperfect Repeats of Oryza meridionalis chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016927 | AAGT | 3 | 781 | 791 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37875839 |
| 2 | NC_016927 | CATT | 3 | 3700 | 3711 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 3 | NC_016927 | TAAA | 4 | 4153 | 4168 | 16 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 4 | NC_016927 | TTTA | 3 | 4467 | 4478 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 5 | NC_016927 | ATAA | 3 | 5330 | 5340 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_016927 | CTTA | 3 | 5376 | 5388 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 7 | NC_016927 | TTCT | 3 | 8036 | 8046 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 8 | NC_016927 | TTTA | 3 | 8212 | 8222 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_016927 | GAAA | 3 | 10365 | 10376 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37875840 |
| 10 | NC_016927 | CCCA | 3 | 12776 | 12787 | 12 | 25 % | 0 % | 0 % | 75 % | 8 % | Non-Coding |
| 11 | NC_016927 | TTTG | 3 | 13538 | 13548 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 12 | NC_016927 | CTTT | 3 | 15219 | 15230 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | Non-Coding |
| 13 | NC_016927 | GTAT | 3 | 16132 | 16142 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 14 | NC_016927 | TTTC | 3 | 16998 | 17008 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 15 | NC_016927 | TTTC | 3 | 19819 | 19831 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 37875840 |
| 16 | NC_016927 | GCGA | 3 | 28860 | 28872 | 13 | 25 % | 0 % | 50 % | 25 % | 7 % | 37875840 |
| 17 | NC_016927 | TTAA | 3 | 29378 | 29389 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 18 | NC_016927 | GAAA | 3 | 29471 | 29483 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 19 | NC_016927 | CTTT | 3 | 32323 | 32333 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 20 | NC_016927 | AAAG | 3 | 33610 | 33620 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37875841 |
| 21 | NC_016927 | TTTC | 3 | 35952 | 35962 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 22 | NC_016927 | AAGA | 3 | 39239 | 39250 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37875841 |
| 23 | NC_016927 | CTAG | 3 | 40182 | 40194 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37875841 |
| 24 | NC_016927 | ATCA | 3 | 42196 | 42206 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 25 | NC_016927 | AAGA | 3 | 42349 | 42359 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 26 | NC_016927 | AACA | 3 | 44661 | 44671 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 27 | NC_016927 | TTGA | 3 | 46579 | 46591 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 28 | NC_016927 | CAGA | 3 | 48155 | 48165 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 37875841 |
| 29 | NC_016927 | TAGG | 4 | 51284 | 51299 | 16 | 25 % | 25 % | 50 % | 0 % | 6 % | Non-Coding |
| 30 | NC_016927 | AATT | 3 | 53427 | 53438 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 31 | NC_016927 | AATA | 4 | 55777 | 55793 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | Non-Coding |
| 32 | NC_016927 | AAAG | 3 | 56387 | 56397 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 33 | NC_016927 | TTCT | 3 | 59464 | 59475 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 34 | NC_016927 | ATTC | 3 | 59495 | 59505 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 35 | NC_016927 | TCTT | 3 | 60886 | 60896 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 36 | NC_016927 | TTCT | 3 | 63714 | 63725 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 37 | NC_016927 | GAAA | 3 | 64915 | 64925 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 38 | NC_016927 | TATT | 3 | 65068 | 65078 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 39 | NC_016927 | GAAA | 3 | 65395 | 65406 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37875843 |
| 40 | NC_016927 | AGAA | 3 | 68367 | 68378 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | Non-Coding |
| 41 | NC_016927 | AAAG | 3 | 68506 | 68516 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 42 | NC_016927 | TTTA | 4 | 71716 | 71731 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 43 | NC_016927 | TTTC | 3 | 74282 | 74292 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 44 | NC_016927 | ATTT | 3 | 75949 | 75960 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 45 | NC_016927 | ATTT | 3 | 77227 | 77237 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 46 | NC_016927 | AATG | 3 | 81020 | 81030 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 47 | NC_016927 | TTCT | 3 | 88392 | 88402 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37875845 |
| 48 | NC_016927 | AAAC | 3 | 93283 | 93295 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | Non-Coding |
| 49 | NC_016927 | ATCC | 3 | 93415 | 93426 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 50 | NC_016927 | CTAT | 3 | 93803 | 93814 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 51 | NC_016927 | ACGG | 3 | 96671 | 96682 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | Non-Coding |
| 52 | NC_016927 | AGGT | 3 | 96955 | 96966 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 53 | NC_016927 | AACG | 3 | 98280 | 98291 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | Non-Coding |
| 54 | NC_016927 | AAAG | 4 | 99611 | 99626 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 55 | NC_016927 | GAAT | 3 | 101220 | 101230 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 56 | NC_016927 | AAGG | 3 | 101232 | 101243 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | Non-Coding |
| 57 | NC_016927 | AATA | 3 | 103760 | 103771 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 58 | NC_016927 | CAAA | 3 | 104535 | 104546 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 37875845 |
| 59 | NC_016927 | AAAT | 3 | 108660 | 108670 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 60 | NC_016927 | TAAC | 3 | 112096 | 112107 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 37875846 |
| 61 | NC_016927 | ATTC | 3 | 113934 | 113944 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 62 | NC_016927 | AAAT | 3 | 114349 | 114359 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 63 | NC_016927 | CTTT | 4 | 115538 | 115553 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 64 | NC_016927 | TCGT | 3 | 116872 | 116883 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | Non-Coding |
| 65 | NC_016927 | CTTA | 3 | 117079 | 117089 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 66 | NC_016927 | CCGT | 3 | 118482 | 118493 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | Non-Coding |
| 67 | NC_016927 | AGGA | 3 | 121514 | 121525 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | Non-Coding |
| 68 | NC_016927 | GGAT | 3 | 121738 | 121749 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 69 | NC_016927 | AGAA | 3 | 126762 | 126772 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37875846 |
| 70 | NC_016927 | TGAA | 3 | 131333 | 131344 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 71 | NC_016927 | CTTT | 3 | 131351 | 131362 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 72 | NC_016927 | CATT | 3 | 134134 | 134144 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |