Tetra-nucleotide Imperfect Repeats of Pentactina rupicola chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016921 | AAGT | 3 | 1094 | 1104 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37782985 |
| 2 | NC_016921 | TTAA | 3 | 1649 | 1660 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_016921 | TCTT | 3 | 2241 | 2251 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37782985 |
| 4 | NC_016921 | ATTT | 3 | 4016 | 4026 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 5 | NC_016921 | ATTA | 3 | 4521 | 4532 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 6 | NC_016921 | TATT | 3 | 5785 | 5797 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 37782985 |
| 7 | NC_016921 | ATTC | 3 | 5847 | 5857 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 37782985 |
| 8 | NC_016921 | TTTA | 3 | 6612 | 6622 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_016921 | ATTT | 4 | 8805 | 8820 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 10 | NC_016921 | TAAA | 3 | 8839 | 8849 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 11 | NC_016921 | GTTA | 4 | 8951 | 8966 | 16 | 25 % | 50 % | 25 % | 0 % | 6 % | Non-Coding |
| 12 | NC_016921 | TTTA | 3 | 10328 | 10339 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 13 | NC_016921 | AAAT | 3 | 10455 | 10466 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 14 | NC_016921 | TATT | 3 | 13180 | 13191 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37782986 |
| 15 | NC_016921 | TTAG | 3 | 23301 | 23311 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 37782986 |
| 16 | NC_016921 | GAAT | 3 | 23387 | 23397 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37782986 |
| 17 | NC_016921 | TCAT | 3 | 27585 | 27595 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 18 | NC_016921 | GGAA | 3 | 29252 | 29263 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | Non-Coding |
| 19 | NC_016921 | AATA | 3 | 33130 | 33142 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 20 | NC_016921 | GAAA | 3 | 35729 | 35740 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37782987 |
| 21 | NC_016921 | TTGC | 3 | 36130 | 36140 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 37782987 |
| 22 | NC_016921 | AATG | 3 | 41598 | 41609 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 37782987 |
| 23 | NC_016921 | ATCA | 3 | 48322 | 48332 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 24 | NC_016921 | AATT | 3 | 48433 | 48444 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_016921 | GTCT | 3 | 51682 | 51693 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 37782987 |
| 26 | NC_016921 | TTTC | 3 | 56185 | 56195 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 27 | NC_016921 | TGCA | 3 | 57497 | 57509 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37782988 |
| 28 | NC_016921 | TTAA | 3 | 58542 | 58553 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 29 | NC_016921 | TATT | 3 | 60271 | 60281 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 30 | NC_016921 | CAAA | 3 | 60976 | 60987 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 37782988 |
| 31 | NC_016921 | GAAA | 3 | 61984 | 61994 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37782988 |
| 32 | NC_016921 | TGAA | 3 | 62002 | 62012 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 33 | NC_016921 | GATC | 3 | 63262 | 63273 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 34 | NC_016921 | TGTT | 3 | 66447 | 66457 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 35 | NC_016921 | GAAA | 3 | 69251 | 69262 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37782989 |
| 36 | NC_016921 | TGAA | 3 | 70383 | 70394 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 37 | NC_016921 | TTTC | 3 | 70417 | 70429 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 38 | NC_016921 | TGAA | 3 | 72894 | 72904 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37782993 |
| 39 | NC_016921 | ATTT | 3 | 77210 | 77220 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37782993 |
| 40 | NC_016921 | ATAA | 4 | 78658 | 78673 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 37782993 |
| 41 | NC_016921 | TCTT | 3 | 80304 | 80314 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37782993 |
| 42 | NC_016921 | CAAT | 3 | 83614 | 83624 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 37782993 |
| 43 | NC_016921 | CTTT | 3 | 84759 | 84771 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 37782993 |
| 44 | NC_016921 | CTTT | 3 | 89983 | 89993 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37782993 |
| 45 | NC_016921 | TGAT | 3 | 91817 | 91829 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37782993 |
| 46 | NC_016921 | TGAT | 3 | 91859 | 91871 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37782993 |
| 47 | NC_016921 | AATA | 3 | 92703 | 92715 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 37782993 |
| 48 | NC_016921 | ATCC | 3 | 103746 | 103757 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 37782993 |
| 49 | NC_016921 | TCTA | 3 | 104142 | 104153 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37782993 |
| 50 | NC_016921 | AAGG | 3 | 104281 | 104291 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 37782993 |
| 51 | NC_016921 | GAGG | 3 | 107014 | 107025 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 37782993 |
| 52 | NC_016921 | AGGT | 3 | 107226 | 107237 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37782993 |
| 53 | NC_016921 | TAAG | 3 | 108346 | 108356 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37782993 |
| 54 | NC_016921 | TATT | 4 | 109381 | 109396 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 37782993 |
| 55 | NC_016921 | TTAA | 5 | 113574 | 113594 | 21 | 50 % | 50 % | 0 % | 0 % | 9 % | 37782993 |
| 56 | NC_016921 | GTTA | 3 | 115700 | 115712 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37782993 |
| 57 | NC_016921 | AAAT | 3 | 115731 | 115741 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37782993 |
| 58 | NC_016921 | TTAT | 3 | 117218 | 117229 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37782993 |
| 59 | NC_016921 | ATTT | 5 | 120903 | 120922 | 20 | 25 % | 75 % | 0 % | 0 % | 10 % | 37782993 |
| 60 | NC_016921 | AATC | 3 | 122927 | 122938 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 37782993 |
| 61 | NC_016921 | GAAT | 3 | 123090 | 123100 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37782993 |
| 62 | NC_016921 | TGGG | 3 | 124874 | 124886 | 13 | 0 % | 25 % | 75 % | 0 % | 7 % | 37782993 |
| 63 | NC_016921 | ATAA | 3 | 125010 | 125022 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 37782993 |
| 64 | NC_016921 | TCAA | 3 | 126179 | 126189 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 37782993 |
| 65 | NC_016921 | CATT | 3 | 127460 | 127471 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37782993 |
| 66 | NC_016921 | AAGA | 3 | 127555 | 127566 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37782993 |
| 67 | NC_016921 | AAGT | 3 | 127655 | 127667 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 37782993 |
| 68 | NC_016921 | ATAA | 5 | 132181 | 132199 | 19 | 75 % | 25 % | 0 % | 0 % | 5 % | 37782993 |
| 69 | NC_016921 | CTTA | 3 | 133227 | 133237 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 37782993 |
| 70 | NC_016921 | GGAT | 3 | 137826 | 137837 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37782993 |
| 71 | NC_016921 | AAAT | 3 | 141689 | 141700 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37782993 |
| 72 | NC_016921 | ATCA | 3 | 149754 | 149766 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 37782993 |
| 73 | NC_016921 | AAAG | 3 | 151590 | 151600 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37782993 |