Penta-nucleotide Imperfect Repeats of Colocasia esculenta chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016753 | TATAT | 3 | 270 | 283 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
2 | NC_016753 | TATTT | 4 | 354 | 374 | 21 | 20 % | 80 % | 0 % | 0 % | 9 % | Non-Coding |
3 | NC_016753 | TTTCT | 3 | 3479 | 3492 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 37781935 |
4 | NC_016753 | TCTCT | 3 | 5535 | 5548 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 37781936 |
5 | NC_016753 | AAATA | 4 | 5781 | 5799 | 19 | 80 % | 20 % | 0 % | 0 % | 10 % | 37781936 |
6 | NC_016753 | TTTTA | 3 | 7367 | 7382 | 16 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
7 | NC_016753 | AGATA | 4 | 8070 | 8090 | 21 | 60 % | 20 % | 20 % | 0 % | 9 % | Non-Coding |
8 | NC_016753 | GAAAA | 3 | 30097 | 30111 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
9 | NC_016753 | CATTA | 3 | 34091 | 34104 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |
10 | NC_016753 | AATTT | 3 | 35399 | 35413 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
11 | NC_016753 | CCAAT | 3 | 40244 | 40257 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | 37781937 |
12 | NC_016753 | CTTAG | 3 | 48551 | 48566 | 16 | 20 % | 40 % | 20 % | 20 % | 6 % | Non-Coding |
13 | NC_016753 | TTGAT | 3 | 50257 | 50272 | 16 | 20 % | 60 % | 20 % | 0 % | 6 % | Non-Coding |
14 | NC_016753 | ATTAT | 4 | 64126 | 64144 | 19 | 40 % | 60 % | 0 % | 0 % | 5 % | Non-Coding |
15 | NC_016753 | CTTTT | 3 | 66699 | 66713 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 37781939 |
16 | NC_016753 | TTTGT | 3 | 68237 | 68250 | 14 | 0 % | 80 % | 20 % | 0 % | 7 % | Non-Coding |
17 | NC_016753 | ATATT | 3 | 73030 | 73043 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
18 | NC_016753 | TTCTA | 3 | 82052 | 82065 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | 37781940 |
19 | NC_016753 | TTTTC | 4 | 85424 | 85442 | 19 | 0 % | 80 % | 0 % | 20 % | 10 % | 37781940 |
20 | NC_016753 | TCCGG | 3 | 100438 | 100452 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 37781940 |
21 | NC_016753 | TTCTT | 3 | 105437 | 105451 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 37781940 |
22 | NC_016753 | ATTAA | 3 | 123837 | 123852 | 16 | 60 % | 40 % | 0 % | 0 % | 6 % | 37781940 |
23 | NC_016753 | TTGTA | 4 | 130432 | 130450 | 19 | 20 % | 60 % | 20 % | 0 % | 10 % | 37781940 |
24 | NC_016753 | AGAAA | 3 | 146640 | 146654 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 37781940 |
25 | NC_016753 | ACCGG | 3 | 151642 | 151656 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |