Tetra-nucleotide Imperfect Repeats of Colocasia esculenta chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016753 | TATT | 3 | 337 | 348 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 2 | NC_016753 | GAAA | 3 | 1986 | 1996 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 3 | NC_016753 | TTTG | 3 | 2561 | 2572 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 37781935 |
| 4 | NC_016753 | TAAT | 3 | 4461 | 4473 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 5 | NC_016753 | TATT | 3 | 6436 | 6447 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37781936 |
| 6 | NC_016753 | AAAG | 3 | 8249 | 8259 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 7 | NC_016753 | TGTT | 3 | 8338 | 8349 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_016753 | AATT | 3 | 9520 | 9532 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 9 | NC_016753 | TTTA | 3 | 10301 | 10312 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 10 | NC_016753 | AATT | 3 | 10346 | 10358 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 11 | NC_016753 | ACTT | 3 | 10529 | 10540 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 12 | NC_016753 | TTAT | 4 | 14361 | 14376 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 37781936 |
| 13 | NC_016753 | ATAA | 3 | 14544 | 14555 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37781936 |
| 14 | NC_016753 | TGTT | 3 | 15996 | 16007 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 15 | NC_016753 | TCAA | 3 | 18798 | 18809 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 37781936 |
| 16 | NC_016753 | TAAA | 3 | 24566 | 24578 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 37781936 |
| 17 | NC_016753 | GAAT | 3 | 24783 | 24793 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37781936 |
| 18 | NC_016753 | GAAA | 3 | 28298 | 28310 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 37781937 |
| 19 | NC_016753 | TATG | 6 | 29081 | 29104 | 24 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 20 | NC_016753 | TATC | 3 | 29519 | 29530 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 21 | NC_016753 | TTTC | 3 | 30073 | 30083 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 22 | NC_016753 | TTGG | 4 | 30783 | 30798 | 16 | 0 % | 50 % | 50 % | 0 % | 6 % | Non-Coding |
| 23 | NC_016753 | TAAT | 3 | 33695 | 33707 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 24 | NC_016753 | AAAT | 3 | 33948 | 33959 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_016753 | TTCA | 3 | 34244 | 34255 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 26 | NC_016753 | CATA | 3 | 34554 | 34565 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 27 | NC_016753 | CATT | 3 | 34835 | 34846 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 28 | NC_016753 | GAAA | 3 | 37260 | 37271 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37781937 |
| 29 | NC_016753 | AAGA | 3 | 42638 | 42649 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37781937 |
| 30 | NC_016753 | AATG | 3 | 43037 | 43048 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 37781937 |
| 31 | NC_016753 | CCAT | 3 | 44764 | 44775 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 32 | NC_016753 | AAGA | 3 | 45844 | 45854 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37781937 |
| 33 | NC_016753 | ATAA | 4 | 47981 | 47996 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 34 | NC_016753 | ATTA | 4 | 50448 | 50464 | 17 | 50 % | 50 % | 0 % | 0 % | 5 % | Non-Coding |
| 35 | NC_016753 | TTGA | 3 | 50953 | 50965 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 36 | NC_016753 | ATTT | 3 | 54761 | 54773 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 37 | NC_016753 | AAAT | 3 | 63712 | 63724 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 38 | NC_016753 | TAAT | 3 | 63741 | 63751 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 39 | NC_016753 | TAAT | 3 | 63761 | 63771 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 40 | NC_016753 | TACT | 3 | 64090 | 64101 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 41 | NC_016753 | TCAG | 3 | 65079 | 65090 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 37781938 |
| 42 | NC_016753 | AATG | 3 | 66924 | 66935 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 37781939 |
| 43 | NC_016753 | TCTT | 3 | 68410 | 68422 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 44 | NC_016753 | TATT | 3 | 68847 | 68858 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 45 | NC_016753 | TATT | 3 | 70939 | 70949 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 46 | NC_016753 | TTGA | 3 | 71404 | 71415 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 37781939 |
| 47 | NC_016753 | ATTA | 3 | 72614 | 72625 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 48 | NC_016753 | ATTT | 3 | 77313 | 77323 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37781940 |
| 49 | NC_016753 | TTTC | 3 | 80396 | 80406 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37781940 |
| 50 | NC_016753 | CATG | 3 | 81985 | 81997 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37781940 |
| 51 | NC_016753 | ATTT | 3 | 85999 | 86010 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 37781940 |
| 52 | NC_016753 | TTCT | 3 | 93306 | 93316 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37781940 |
| 53 | NC_016753 | CTTT | 3 | 94499 | 94509 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37781940 |
| 54 | NC_016753 | TGAT | 3 | 96342 | 96354 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37781940 |
| 55 | NC_016753 | AGAA | 3 | 96441 | 96451 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37781940 |
| 56 | NC_016753 | AATA | 3 | 97255 | 97267 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 37781940 |
| 57 | NC_016753 | TTTC | 3 | 97317 | 97328 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 37781940 |
| 58 | NC_016753 | TCTA | 3 | 99489 | 99500 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37781940 |
| 59 | NC_016753 | ATCC | 3 | 108743 | 108754 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 37781940 |
| 60 | NC_016753 | TCTA | 3 | 109132 | 109143 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37781940 |
| 61 | NC_016753 | GAGG | 3 | 111983 | 111994 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 37781940 |
| 62 | NC_016753 | AGGT | 3 | 112195 | 112206 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 37781940 |
| 63 | NC_016753 | TAAG | 3 | 113315 | 113325 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37781940 |
| 64 | NC_016753 | AGAA | 3 | 114720 | 114731 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37781940 |
| 65 | NC_016753 | ATTA | 3 | 114973 | 114983 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 37781940 |
| 66 | NC_016753 | AAAT | 3 | 115822 | 115833 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 37781940 |
| 67 | NC_016753 | AAAT | 3 | 117509 | 117519 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37781940 |
| 68 | NC_016753 | GATA | 3 | 118887 | 118897 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37781940 |
| 69 | NC_016753 | CAAA | 3 | 119091 | 119101 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 37781940 |
| 70 | NC_016753 | TCAA | 3 | 119102 | 119112 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 37781940 |
| 71 | NC_016753 | AAAT | 3 | 119475 | 119486 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37781940 |
| 72 | NC_016753 | ATTT | 3 | 123005 | 123016 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37781940 |
| 73 | NC_016753 | TTAT | 3 | 123917 | 123927 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37781940 |
| 74 | NC_016753 | ATTT | 3 | 124209 | 124220 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37781940 |
| 75 | NC_016753 | CGAT | 3 | 124350 | 124361 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 37781940 |
| 76 | NC_016753 | ATTA | 3 | 125803 | 125814 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 37781940 |
| 77 | NC_016753 | TGAA | 3 | 128019 | 128029 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37781940 |
| 78 | NC_016753 | ATTC | 3 | 129861 | 129871 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 37781940 |
| 79 | NC_016753 | ATTT | 5 | 130359 | 130377 | 19 | 25 % | 75 % | 0 % | 0 % | 10 % | 37781940 |
| 80 | NC_016753 | TAAT | 3 | 132992 | 133003 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37781940 |
| 81 | NC_016753 | CATT | 3 | 133154 | 133165 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37781940 |
| 82 | NC_016753 | AAAT | 3 | 133927 | 133938 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37781940 |
| 83 | NC_016753 | TTCT | 3 | 135198 | 135208 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37781940 |
| 84 | NC_016753 | TTCC | 3 | 136845 | 136855 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 37781940 |
| 85 | NC_016753 | CTTA | 3 | 138770 | 138780 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 37781940 |
| 86 | NC_016753 | CTAC | 3 | 139887 | 139898 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 37781940 |
| 87 | NC_016753 | TTCC | 3 | 142808 | 142819 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | 37781940 |
| 88 | NC_016753 | GGAT | 3 | 143341 | 143352 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37781940 |
| 89 | NC_016753 | AATA | 4 | 147228 | 147243 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 37781940 |
| 90 | NC_016753 | TAGA | 3 | 152595 | 152606 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 91 | NC_016753 | TGAA | 3 | 154766 | 154777 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 37781944 |
| 92 | NC_016753 | TTCT | 3 | 155644 | 155654 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37781944 |
| 93 | NC_016753 | ATCA | 3 | 155741 | 155753 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 37781944 |
| 94 | NC_016753 | TGAT | 3 | 155836 | 155848 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37781944 |
| 95 | NC_016753 | AAAG | 3 | 157586 | 157596 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37781944 |
| 96 | NC_016753 | ATTT | 3 | 158652 | 158663 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37781944 |