Penta-nucleotide Imperfect Repeats of Ricinus communis chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016736 | TAAAA | 3 | 4265 | 4279 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
2 | NC_016736 | TCTCT | 3 | 5430 | 5443 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | Non-Coding |
3 | NC_016736 | TCTTT | 4 | 7976 | 7994 | 19 | 0 % | 80 % | 0 % | 20 % | 5 % | Non-Coding |
4 | NC_016736 | GATAA | 3 | 8306 | 8320 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
5 | NC_016736 | GAATA | 3 | 10247 | 10261 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
6 | NC_016736 | AATAT | 3 | 10468 | 10482 | 15 | 60 % | 40 % | 0 % | 0 % | 6 % | Non-Coding |
7 | NC_016736 | TTTTA | 3 | 14311 | 14325 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
8 | NC_016736 | CAAAA | 3 | 14532 | 14546 | 15 | 80 % | 0 % | 0 % | 20 % | 0 % | Non-Coding |
9 | NC_016736 | TATAT | 4 | 34447 | 34469 | 23 | 40 % | 60 % | 0 % | 0 % | 8 % | Non-Coding |
10 | NC_016736 | TTTTC | 3 | 35804 | 35818 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | Non-Coding |
11 | NC_016736 | TATTT | 4 | 50219 | 50237 | 19 | 20 % | 80 % | 0 % | 0 % | 10 % | Non-Coding |
12 | NC_016736 | AAGAA | 3 | 50980 | 50993 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | Non-Coding |
13 | NC_016736 | CCTTT | 3 | 67229 | 67243 | 15 | 0 % | 60 % | 0 % | 40 % | 6 % | 37245015 |
14 | NC_016736 | ATTTT | 3 | 70272 | 70286 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
15 | NC_016736 | TTCTA | 3 | 70469 | 70483 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | Non-Coding |
16 | NC_016736 | TAATA | 4 | 74506 | 74524 | 19 | 60 % | 40 % | 0 % | 0 % | 5 % | Non-Coding |
17 | NC_016736 | ATTTT | 3 | 82033 | 82047 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | 37245016 |
18 | NC_016736 | ATATG | 3 | 92359 | 92373 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 37245016 |
19 | NC_016736 | TCCGG | 3 | 100994 | 101008 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 37245016 |
20 | NC_016736 | AAAAT | 4 | 119834 | 119853 | 20 | 80 % | 20 % | 0 % | 0 % | 5 % | 37245016 |
21 | NC_016736 | AAAAG | 3 | 121047 | 121061 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 37245016 |
22 | NC_016736 | TTAAC | 3 | 121311 | 121324 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | 37245016 |
23 | NC_016736 | AAAAG | 3 | 134718 | 134732 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 37245016 |
24 | NC_016736 | ACCGG | 3 | 151804 | 151818 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
25 | NC_016736 | CATAC | 3 | 153130 | 153143 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |