Penta-nucleotide Imperfect Repeats of Brassica napus chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016734 | TATTT | 4 | 199 | 218 | 20 | 20 % | 80 % | 0 % | 0 % | 10 % | Non-Coding |
2 | NC_016734 | AAAAT | 3 | 4129 | 4143 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
3 | NC_016734 | GAAAA | 3 | 4491 | 4505 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
4 | NC_016734 | TCTCT | 3 | 5098 | 5111 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 38393050 |
5 | NC_016734 | TACCT | 3 | 6326 | 6339 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | Non-Coding |
6 | NC_016734 | TAAGA | 3 | 25335 | 25348 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | 38393049 |
7 | NC_016734 | GAAAA | 4 | 41421 | 41440 | 20 | 80 % | 0 % | 20 % | 0 % | 10 % | Non-Coding |
8 | NC_016734 | TGAAA | 3 | 49774 | 49788 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
9 | NC_016734 | TTATC | 3 | 50664 | 50678 | 15 | 20 % | 60 % | 0 % | 20 % | 0 % | Non-Coding |
10 | NC_016734 | TTTTA | 4 | 63630 | 63649 | 20 | 20 % | 80 % | 0 % | 0 % | 5 % | Non-Coding |
11 | NC_016734 | AAAAT | 4 | 64749 | 64769 | 21 | 80 % | 20 % | 0 % | 0 % | 9 % | Non-Coding |
12 | NC_016734 | ATTTA | 3 | 70541 | 70556 | 16 | 40 % | 60 % | 0 % | 0 % | 6 % | 38393050 |
13 | NC_016734 | TCCGG | 3 | 93615 | 93629 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 38393050 |
14 | NC_016734 | TTTCG | 3 | 96193 | 96206 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | 38393050 |
15 | NC_016734 | TCTAA | 3 | 111817 | 111831 | 15 | 40 % | 40 % | 0 % | 20 % | 6 % | 38393051 |
16 | NC_016734 | TTTAA | 3 | 112496 | 112510 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | 38393051 |
17 | NC_016734 | AAATA | 3 | 114133 | 114146 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 38393051 |
18 | NC_016734 | AATAA | 3 | 115881 | 115894 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 38393051 |
19 | NC_016734 | TGTTA | 3 | 119595 | 119609 | 15 | 20 % | 60 % | 20 % | 0 % | 6 % | 38393051 |
20 | NC_016734 | ACCGG | 3 | 142261 | 142275 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |