Tetra-nucleotide Imperfect Repeats of Brassica napus chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016734 | TACC | 3 | 576 | 586 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 38393048 |
| 2 | NC_016734 | GTTT | 3 | 1838 | 1849 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 3 | NC_016734 | TTTA | 3 | 3751 | 3762 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_016734 | TTCA | 3 | 4922 | 4933 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 38393050 |
| 5 | NC_016734 | ATTC | 3 | 5461 | 5471 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 38393050 |
| 6 | NC_016734 | TTCT | 3 | 6771 | 6782 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 7 | NC_016734 | TTTA | 4 | 6846 | 6861 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 8 | NC_016734 | TTCT | 3 | 7458 | 7469 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 38393043 |
| 9 | NC_016734 | GTTT | 3 | 9732 | 9743 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 38393045 |
| 10 | NC_016734 | TTTC | 3 | 11908 | 11919 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 38393046 |
| 11 | NC_016734 | TTTG | 3 | 12541 | 12552 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 12 | NC_016734 | AAAT | 3 | 13224 | 13235 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 13 | NC_016734 | TTTA | 3 | 14483 | 14494 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 14 | NC_016734 | TTCA | 3 | 21693 | 21704 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 38393049 |
| 15 | NC_016734 | AAAT | 3 | 26886 | 26896 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 16 | NC_016734 | CAAA | 3 | 28059 | 28070 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 17 | NC_016734 | TTTA | 3 | 28465 | 28475 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 18 | NC_016734 | AGAA | 3 | 29787 | 29798 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 19 | NC_016734 | ATTT | 3 | 30203 | 30213 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 20 | NC_016734 | ATTT | 3 | 30235 | 30246 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 21 | NC_016734 | TTCT | 3 | 32339 | 32350 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 38393043 |
| 22 | NC_016734 | GAAA | 3 | 33336 | 33347 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 38393043 |
| 23 | NC_016734 | CTGG | 3 | 34383 | 34395 | 13 | 0 % | 25 % | 50 % | 25 % | 7 % | Non-Coding |
| 24 | NC_016734 | TTAT | 3 | 34511 | 34521 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 25 | NC_016734 | TTTG | 3 | 35456 | 35466 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 26 | NC_016734 | AAAC | 3 | 35853 | 35864 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 27 | NC_016734 | ATAA | 3 | 36449 | 36460 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 28 | NC_016734 | TTAA | 5 | 42064 | 42083 | 20 | 50 % | 50 % | 0 % | 0 % | 10 % | 38393051 |
| 29 | NC_016734 | AAAT | 3 | 42952 | 42962 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 38393051 |
| 30 | NC_016734 | GTAA | 3 | 43597 | 43607 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 38393051 |
| 31 | NC_016734 | TAAA | 3 | 45525 | 45536 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 32 | NC_016734 | TTAA | 3 | 45545 | 45556 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_016734 | TATC | 4 | 47222 | 47237 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 34 | NC_016734 | GATT | 3 | 49461 | 49472 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 35 | NC_016734 | AGAA | 3 | 49889 | 49900 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_016734 | AATT | 3 | 55572 | 55583 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_016734 | CAGC | 3 | 62821 | 62832 | 12 | 25 % | 0 % | 25 % | 50 % | 8 % | 38393048 |
| 38 | NC_016734 | AAAG | 3 | 65671 | 65681 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 39 | NC_016734 | TTGA | 3 | 70016 | 70027 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 38393050 |
| 40 | NC_016734 | TGTC | 3 | 70252 | 70262 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 38393050 |
| 41 | NC_016734 | AGAA | 3 | 72241 | 72252 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 38393050 |
| 42 | NC_016734 | CTTT | 3 | 72740 | 72750 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 38393050 |
| 43 | NC_016734 | TAAA | 3 | 75587 | 75598 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 38393050 |
| 44 | NC_016734 | TTCA | 3 | 78753 | 78764 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 38393050 |
| 45 | NC_016734 | TAGT | 3 | 81422 | 81432 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 38393050 |
| 46 | NC_016734 | CAAT | 3 | 81748 | 81758 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 38393050 |
| 47 | NC_016734 | AATT | 3 | 82080 | 82090 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 38393050 |
| 48 | NC_016734 | TTCT | 3 | 86826 | 86836 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 38393050 |
| 49 | NC_016734 | ATTT | 4 | 87108 | 87123 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 38393050 |
| 50 | NC_016734 | CTTT | 3 | 88025 | 88035 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 38393050 |
| 51 | NC_016734 | TGAT | 3 | 89892 | 89904 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 38393050 |
| 52 | NC_016734 | AATA | 3 | 90739 | 90751 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 38393050 |
| 53 | NC_016734 | ATCC | 3 | 101833 | 101844 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 38393051 |
| 54 | NC_016734 | GAGG | 3 | 104891 | 104902 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 38393051 |
| 55 | NC_016734 | AGGT | 3 | 105103 | 105114 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 38393051 |
| 56 | NC_016734 | TAAG | 3 | 106164 | 106174 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 38393051 |
| 57 | NC_016734 | GAAA | 3 | 109010 | 109021 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 38393051 |
| 58 | NC_016734 | ATAG | 3 | 111092 | 111103 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 38393051 |
| 59 | NC_016734 | ATTT | 3 | 111303 | 111313 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 38393051 |
| 60 | NC_016734 | TATT | 3 | 113084 | 113095 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 38393051 |
| 61 | NC_016734 | AAAT | 5 | 115828 | 115847 | 20 | 75 % | 25 % | 0 % | 0 % | 10 % | 38393051 |
| 62 | NC_016734 | TCTT | 3 | 118378 | 118389 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 38393051 |
| 63 | NC_016734 | TTCT | 4 | 119419 | 119434 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 38393051 |
| 64 | NC_016734 | AATT | 3 | 121879 | 121890 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 38393051 |
| 65 | NC_016734 | CTTT | 3 | 122125 | 122135 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 38393051 |
| 66 | NC_016734 | TCAA | 3 | 123005 | 123015 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 38393051 |
| 67 | NC_016734 | CTTT | 3 | 123459 | 123469 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 38393051 |
| 68 | NC_016734 | TTTG | 3 | 124014 | 124024 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 38393051 |
| 69 | NC_016734 | TATC | 3 | 125709 | 125721 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 38393051 |
| 70 | NC_016734 | CTTA | 3 | 129717 | 129727 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 38393051 |
| 71 | NC_016734 | GGAT | 3 | 134047 | 134058 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 38393051 |
| 72 | NC_016734 | CATA | 3 | 138934 | 138945 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 38393051 |
| 73 | NC_016734 | ATCA | 3 | 146029 | 146041 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 38393051 |
| 74 | NC_016734 | TGAT | 3 | 146124 | 146136 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 38393051 |
| 75 | NC_016734 | AAAG | 3 | 147856 | 147866 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 38393051 |
| 76 | NC_016734 | TATT | 3 | 148927 | 148938 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 38393051 |