Tetra-nucleotide Imperfect Repeats of Synedra acus chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016731 | AATT | 3 | 712 | 723 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37882446 |
| 2 | NC_016731 | ATAA | 3 | 8030 | 8041 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37882447 |
| 3 | NC_016731 | ATTT | 3 | 10195 | 10207 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 37882448 |
| 4 | NC_016731 | AATT | 3 | 16652 | 16662 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 5 | NC_016731 | AATT | 3 | 16950 | 16962 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 6 | NC_016731 | TTAT | 3 | 17834 | 17844 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37882449 |
| 7 | NC_016731 | TTTA | 3 | 18281 | 18291 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37882449 |
| 8 | NC_016731 | TATT | 3 | 20132 | 20143 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_016731 | TTTA | 3 | 20698 | 20709 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 10 | NC_016731 | AAAT | 3 | 22365 | 22375 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 11 | NC_016731 | CTGG | 3 | 22479 | 22489 | 11 | 0 % | 25 % | 50 % | 25 % | 9 % | 37882450 |
| 12 | NC_016731 | ATTA | 3 | 22664 | 22674 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 37882450 |
| 13 | NC_016731 | AATT | 3 | 22847 | 22858 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 37882450 |
| 14 | NC_016731 | ATTT | 3 | 27851 | 27861 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 15 | NC_016731 | AATT | 3 | 27998 | 28009 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37882450 |
| 16 | NC_016731 | GTTC | 3 | 29900 | 29910 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 37882451 |
| 17 | NC_016731 | TTTA | 3 | 29916 | 29926 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37882451 |
| 18 | NC_016731 | TTTA | 3 | 31001 | 31011 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37882451 |
| 19 | NC_016731 | AACC | 3 | 40707 | 40717 | 11 | 50 % | 0 % | 0 % | 50 % | 9 % | 37882452 |
| 20 | NC_016731 | ATAA | 3 | 46090 | 46101 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37882452 |
| 21 | NC_016731 | AATA | 3 | 46390 | 46401 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37882452 |
| 22 | NC_016731 | AATT | 3 | 47406 | 47418 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 37882452 |
| 23 | NC_016731 | CTCA | 3 | 48971 | 48981 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 37882452 |
| 24 | NC_016731 | TAAA | 3 | 49608 | 49618 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37882452 |
| 25 | NC_016731 | ATTT | 4 | 52011 | 52026 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 26 | NC_016731 | TGCA | 3 | 52151 | 52163 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37882453 |
| 27 | NC_016731 | TTAA | 3 | 52749 | 52760 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37882453 |
| 28 | NC_016731 | AAAT | 3 | 52972 | 52982 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37882453 |
| 29 | NC_016731 | AATT | 3 | 54074 | 54085 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37882453 |
| 30 | NC_016731 | TAAA | 4 | 56701 | 56716 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 31 | NC_016731 | GAAA | 3 | 64366 | 64376 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 32 | NC_016731 | AGGT | 3 | 66744 | 66755 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 33 | NC_016731 | GTAA | 3 | 67891 | 67902 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 34 | NC_016731 | AATT | 3 | 74784 | 74795 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 35 | NC_016731 | AATG | 3 | 84171 | 84181 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37882456 |
| 36 | NC_016731 | TGAA | 3 | 84851 | 84861 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37882456 |
| 37 | NC_016731 | TTAA | 3 | 85443 | 85454 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37882456 |
| 38 | NC_016731 | AATT | 4 | 85724 | 85739 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | 37882456 |
| 39 | NC_016731 | TTTA | 3 | 88640 | 88650 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 40 | NC_016731 | ATTT | 3 | 89069 | 89079 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37882457 |
| 41 | NC_016731 | GAAT | 3 | 89572 | 89582 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37882457 |
| 42 | NC_016731 | AATC | 3 | 89663 | 89674 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 37882457 |
| 43 | NC_016731 | AATT | 4 | 89885 | 89899 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | 37882457 |
| 44 | NC_016731 | ATTG | 3 | 90163 | 90173 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 37882457 |
| 45 | NC_016731 | AATT | 3 | 90732 | 90743 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37882457 |
| 46 | NC_016731 | AATT | 3 | 94885 | 94896 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37882457 |
| 47 | NC_016731 | AAGA | 3 | 95333 | 95344 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 48 | NC_016731 | AAGT | 3 | 96729 | 96739 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37882458 |
| 49 | NC_016731 | CATT | 3 | 97370 | 97380 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 37882458 |
| 50 | NC_016731 | TAAA | 3 | 99057 | 99067 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37882458 |
| 51 | NC_016731 | AAAC | 3 | 101426 | 101437 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 37882458 |
| 52 | NC_016731 | AATT | 3 | 104939 | 104950 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37882459 |
| 53 | NC_016731 | TTTA | 3 | 107705 | 107716 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 54 | NC_016731 | TATT | 3 | 112700 | 112711 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 55 | NC_016731 | TTTA | 3 | 113040 | 113050 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 56 | NC_016731 | CTTT | 3 | 113598 | 113608 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |