Tetra-nucleotide Imperfect Repeats of Silene latifolia chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016730 | TACC | 3 | 535 | 545 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 37424993 |
| 2 | NC_016730 | AAGT | 3 | 1019 | 1029 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37424993 |
| 3 | NC_016730 | TCTT | 3 | 2153 | 2163 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37424993 |
| 4 | NC_016730 | AAAT | 3 | 2744 | 2754 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37424993 |
| 5 | NC_016730 | ATAA | 3 | 2877 | 2888 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37424993 |
| 6 | NC_016730 | TTTG | 3 | 3565 | 3576 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 7 | NC_016730 | TGGA | 3 | 6314 | 6324 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | Non-Coding |
| 8 | NC_016730 | AGAT | 3 | 7403 | 7413 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 9 | NC_016730 | AAAC | 3 | 8785 | 8795 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 10 | NC_016730 | TGAA | 3 | 11587 | 11599 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 37424993 |
| 11 | NC_016730 | GAAG | 3 | 12543 | 12554 | 12 | 50 % | 0 % | 50 % | 0 % | 0 % | Non-Coding |
| 12 | NC_016730 | ACTA | 3 | 13432 | 13443 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 13 | NC_016730 | AAAT | 3 | 15297 | 15307 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 14 | NC_016730 | CTAT | 3 | 22470 | 22481 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37424994 |
| 15 | NC_016730 | CCTA | 3 | 23463 | 23473 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 37424994 |
| 16 | NC_016730 | TAAA | 3 | 29779 | 29790 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 17 | NC_016730 | TAAA | 3 | 29980 | 29990 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 18 | NC_016730 | CTTT | 3 | 30184 | 30195 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 19 | NC_016730 | GAAA | 3 | 32455 | 32466 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424994 |
| 20 | NC_016730 | GGGA | 3 | 32575 | 32586 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 37424994 |
| 21 | NC_016730 | TTGC | 3 | 32856 | 32866 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 37424994 |
| 22 | NC_016730 | TAAT | 3 | 33418 | 33429 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37424994 |
| 23 | NC_016730 | CCAT | 3 | 33872 | 33883 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | Non-Coding |
| 24 | NC_016730 | AAAT | 3 | 34362 | 34373 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_016730 | ATTG | 3 | 36673 | 36683 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 37424994 |
| 26 | NC_016730 | TTTA | 3 | 40058 | 40069 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_016730 | AAAT | 3 | 40807 | 40818 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 28 | NC_016730 | TTTA | 4 | 44715 | 44730 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 29 | NC_016730 | ATTT | 3 | 45287 | 45297 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 30 | NC_016730 | AGAA | 3 | 46044 | 46055 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 31 | NC_016730 | AACA | 3 | 47484 | 47495 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 32 | NC_016730 | AAAC | 3 | 50338 | 50350 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | Non-Coding |
| 33 | NC_016730 | TAAT | 5 | 57894 | 57914 | 21 | 50 % | 50 % | 0 % | 0 % | 4 % | Non-Coding |
| 34 | NC_016730 | GAAA | 3 | 59831 | 59842 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424996 |
| 35 | NC_016730 | ACTG | 3 | 60505 | 60516 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 37424996 |
| 36 | NC_016730 | AAAG | 3 | 60518 | 60528 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 37 | NC_016730 | TTCC | 3 | 62135 | 62147 | 13 | 0 % | 50 % | 0 % | 50 % | 7 % | Non-Coding |
| 38 | NC_016730 | TACA | 3 | 66509 | 66520 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 37424997 |
| 39 | NC_016730 | TAAA | 3 | 66534 | 66545 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37424997 |
| 40 | NC_016730 | TAAA | 3 | 66675 | 66686 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 41 | NC_016730 | TTTA | 3 | 67303 | 67314 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 42 | NC_016730 | TGAA | 3 | 67765 | 67776 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 43 | NC_016730 | AATA | 3 | 69441 | 69452 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37424997 |
| 44 | NC_016730 | CCAG | 3 | 69769 | 69779 | 11 | 25 % | 0 % | 25 % | 50 % | 9 % | 37424997 |
| 45 | NC_016730 | AAAT | 3 | 70068 | 70079 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37424997 |
| 46 | NC_016730 | TTTC | 3 | 73678 | 73689 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 37424997 |
| 47 | NC_016730 | TATT | 3 | 75226 | 75237 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37424997 |
| 48 | NC_016730 | TCTT | 3 | 75537 | 75547 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37424997 |
| 49 | NC_016730 | ACTA | 3 | 75569 | 75579 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 37424997 |
| 50 | NC_016730 | TCTT | 3 | 76638 | 76649 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 37424997 |
| 51 | NC_016730 | AATC | 3 | 77019 | 77030 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 37424997 |
| 52 | NC_016730 | AAAT | 3 | 78682 | 78694 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 37424997 |
| 53 | NC_016730 | CTTT | 3 | 79357 | 79367 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37424997 |
| 54 | NC_016730 | AAAT | 3 | 79940 | 79950 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37424997 |
| 55 | NC_016730 | TTCT | 3 | 85712 | 85722 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37424997 |
| 56 | NC_016730 | TTTA | 3 | 85999 | 86010 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37424997 |
| 57 | NC_016730 | ATCG | 3 | 86482 | 86494 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37424997 |
| 58 | NC_016730 | TGAT | 3 | 88715 | 88727 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37424997 |
| 59 | NC_016730 | AATA | 3 | 89571 | 89583 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 37424997 |
| 60 | NC_016730 | AATA | 3 | 91408 | 91419 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37424997 |
| 61 | NC_016730 | GCTC | 3 | 96335 | 96345 | 11 | 0 % | 25 % | 25 % | 50 % | 9 % | Non-Coding |
| 62 | NC_016730 | ATCC | 3 | 100185 | 100196 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 63 | NC_016730 | TCTA | 3 | 100570 | 100581 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 64 | NC_016730 | GAGG | 3 | 103469 | 103480 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 65 | NC_016730 | AGGT | 3 | 103680 | 103691 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | Non-Coding |
| 66 | NC_016730 | TAAG | 3 | 104800 | 104810 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 67 | NC_016730 | TGGA | 3 | 108315 | 108326 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 68 | NC_016730 | AAGA | 3 | 112128 | 112138 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 69 | NC_016730 | GAAA | 3 | 113886 | 113897 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424999 |
| 70 | NC_016730 | TAGA | 3 | 113927 | 113938 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 37424999 |
| 71 | NC_016730 | TAAA | 3 | 115861 | 115871 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 72 | NC_016730 | AAAT | 3 | 118035 | 118045 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 73 | NC_016730 | CCCA | 3 | 118369 | 118380 | 12 | 25 % | 0 % | 0 % | 75 % | 8 % | 37425000 |
| 74 | NC_016730 | TTAT | 3 | 121906 | 121916 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 75 | NC_016730 | ATCT | 3 | 122013 | 122024 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 76 | NC_016730 | ATGA | 3 | 122479 | 122490 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 37425000 |
| 77 | NC_016730 | TTTA | 3 | 122975 | 122987 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 37425000 |
| 78 | NC_016730 | ATTC | 4 | 123195 | 123209 | 15 | 25 % | 50 % | 0 % | 25 % | 6 % | 37425000 |
| 79 | NC_016730 | ATTT | 3 | 123249 | 123260 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37425000 |
| 80 | NC_016730 | ATTT | 3 | 123704 | 123715 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37425000 |
| 81 | NC_016730 | TTTG | 3 | 123754 | 123765 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 37425000 |
| 82 | NC_016730 | TCTT | 3 | 124368 | 124378 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37425000 |
| 83 | NC_016730 | ATTT | 3 | 125835 | 125846 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37425000 |
| 84 | NC_016730 | TTTA | 3 | 125848 | 125858 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37425000 |
| 85 | NC_016730 | TCCA | 3 | 126115 | 126126 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 37425000 |
| 86 | NC_016730 | AATT | 3 | 128319 | 128329 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 87 | NC_016730 | CTTA | 3 | 129631 | 129641 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 88 | NC_016730 | CTAC | 3 | 130748 | 130759 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | Non-Coding |
| 89 | NC_016730 | CCTT | 3 | 133719 | 133729 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 90 | NC_016730 | GGAT | 3 | 134245 | 134256 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 91 | NC_016730 | AGAA | 3 | 134747 | 134759 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 92 | NC_016730 | GAGC | 3 | 138096 | 138106 | 11 | 25 % | 0 % | 50 % | 25 % | 9 % | Non-Coding |
| 93 | NC_016730 | AGAA | 4 | 139562 | 139576 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 94 | NC_016730 | TGAT | 3 | 145851 | 145863 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37425000 |
| 95 | NC_016730 | CGAT | 3 | 147947 | 147959 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37425000 |