Tetra-nucleotide Imperfect Repeats of Silene noctiflora chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016728 | TACC | 3 | 613 | 623 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 37424976 |
| 2 | NC_016728 | AAAT | 3 | 2778 | 2788 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37424976 |
| 3 | NC_016728 | ATAA | 3 | 2911 | 2922 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37424976 |
| 4 | NC_016728 | TTTG | 3 | 3609 | 3620 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 5 | NC_016728 | AAAT | 3 | 5229 | 5240 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37424976 |
| 6 | NC_016728 | AGAT | 3 | 7449 | 7459 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 7 | NC_016728 | AAAC | 3 | 8777 | 8787 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 8 | NC_016728 | TGAA | 3 | 11567 | 11579 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 37424977 |
| 9 | NC_016728 | CAGC | 3 | 12914 | 12926 | 13 | 25 % | 0 % | 25 % | 50 % | 7 % | 37424977 |
| 10 | NC_016728 | ACTA | 3 | 13425 | 13436 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 11 | NC_016728 | AAAT | 3 | 15292 | 15302 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_016728 | CTAT | 3 | 21659 | 21670 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37424977 |
| 13 | NC_016728 | CCTA | 3 | 22652 | 22662 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 37424977 |
| 14 | NC_016728 | TTTC | 3 | 27091 | 27102 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | Non-Coding |
| 15 | NC_016728 | GTCC | 3 | 30364 | 30375 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | 37424978 |
| 16 | NC_016728 | TTTC | 3 | 38499 | 38510 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 17 | NC_016728 | AAAT | 3 | 39268 | 39278 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 18 | NC_016728 | ATTG | 3 | 41072 | 41083 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 19 | NC_016728 | ATTT | 3 | 43789 | 43799 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 20 | NC_016728 | ATTT | 3 | 43905 | 43916 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 21 | NC_016728 | AAAT | 3 | 43930 | 43942 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 22 | NC_016728 | TAAA | 3 | 44529 | 44540 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 23 | NC_016728 | TTAT | 3 | 49644 | 49656 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 24 | NC_016728 | ATGG | 3 | 50725 | 50736 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | Non-Coding |
| 25 | NC_016728 | TGTA | 3 | 51101 | 51111 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 26 | NC_016728 | AAGC | 3 | 51743 | 51753 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 37424979 |
| 27 | NC_016728 | TCCC | 3 | 52025 | 52036 | 12 | 0 % | 25 % | 0 % | 75 % | 8 % | 37424979 |
| 28 | NC_016728 | GGAT | 3 | 54149 | 54160 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 29 | NC_016728 | TACA | 3 | 56397 | 56408 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 37424979 |
| 30 | NC_016728 | TAAA | 3 | 56422 | 56433 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37424979 |
| 31 | NC_016728 | TAAA | 3 | 56572 | 56584 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 32 | NC_016728 | TTTA | 3 | 57024 | 57035 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 33 | NC_016728 | TGAA | 3 | 57486 | 57497 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 34 | NC_016728 | TTTA | 3 | 60733 | 60744 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37424980 |
| 35 | NC_016728 | TAAA | 3 | 62844 | 62854 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37424980 |
| 36 | NC_016728 | TCTT | 3 | 65351 | 65361 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37424980 |
| 37 | NC_016728 | TCAG | 3 | 65363 | 65374 | 12 | 25 % | 25 % | 25 % | 25 % | 0 % | 37424980 |
| 38 | NC_016728 | TTTC | 3 | 66038 | 66049 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 37424980 |
| 39 | NC_016728 | ATTT | 3 | 66450 | 66460 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37424980 |
| 40 | NC_016728 | TTTC | 3 | 70386 | 70397 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 37424980 |
| 41 | NC_016728 | ATTT | 3 | 70613 | 70623 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37424980 |
| 42 | NC_016728 | TATT | 3 | 71948 | 71959 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37424980 |
| 43 | NC_016728 | ACTA | 3 | 72283 | 72293 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 37424980 |
| 44 | NC_016728 | TCTT | 3 | 73343 | 73354 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 37424980 |
| 45 | NC_016728 | AATC | 3 | 73725 | 73736 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 37424980 |
| 46 | NC_016728 | AAGA | 3 | 79843 | 79854 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424980 |
| 47 | NC_016728 | TTCT | 3 | 81583 | 81593 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37424980 |
| 48 | NC_016728 | GAAA | 3 | 81707 | 81719 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 37424980 |
| 49 | NC_016728 | ATCG | 3 | 82188 | 82200 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37424980 |
| 50 | NC_016728 | AGGG | 3 | 86107 | 86118 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 37424980 |
| 51 | NC_016728 | GCTC | 3 | 91255 | 91265 | 11 | 0 % | 25 % | 25 % | 50 % | 9 % | Non-Coding |
| 52 | NC_016728 | ATCC | 3 | 95140 | 95151 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 53 | NC_016728 | TCTA | 3 | 95503 | 95514 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 54 | NC_016728 | GAGG | 3 | 98412 | 98423 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 55 | NC_016728 | AGGT | 3 | 98623 | 98634 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | Non-Coding |
| 56 | NC_016728 | CCGA | 3 | 98862 | 98872 | 11 | 25 % | 0 % | 25 % | 50 % | 9 % | Non-Coding |
| 57 | NC_016728 | TAAG | 3 | 99741 | 99751 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 58 | NC_016728 | AGAA | 3 | 103294 | 103306 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 37424983 |
| 59 | NC_016728 | TGGA | 3 | 104063 | 104074 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37424983 |
| 60 | NC_016728 | CAAT | 3 | 104307 | 104317 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 37424983 |
| 61 | NC_016728 | ACAA | 3 | 106831 | 106842 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 37424983 |
| 62 | NC_016728 | TTCA | 3 | 107887 | 107898 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37424983 |
| 63 | NC_016728 | GAAA | 3 | 107926 | 107937 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424983 |
| 64 | NC_016728 | TAGA | 3 | 108329 | 108340 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 65 | NC_016728 | TTAA | 3 | 111785 | 111796 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 66 | NC_016728 | TTTA | 3 | 112630 | 112642 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 67 | NC_016728 | AAGA | 3 | 112878 | 112888 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 68 | NC_016728 | ATTC | 3 | 114575 | 114586 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 69 | NC_016728 | GAAA | 3 | 114700 | 114711 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424983 |
| 70 | NC_016728 | TAGA | 3 | 114741 | 114752 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 37424983 |
| 71 | NC_016728 | TAAA | 3 | 116675 | 116685 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 72 | NC_016728 | AAAT | 3 | 118852 | 118862 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 73 | NC_016728 | CCCA | 3 | 119186 | 119197 | 12 | 25 % | 0 % | 0 % | 75 % | 8 % | 37424984 |
| 74 | NC_016728 | CATG | 3 | 119817 | 119828 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 37424984 |
| 75 | NC_016728 | TTAT | 3 | 122710 | 122720 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 76 | NC_016728 | ATCT | 3 | 122774 | 122785 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 77 | NC_016728 | TTTC | 3 | 123178 | 123189 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 37424984 |
| 78 | NC_016728 | TGAA | 3 | 123217 | 123228 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 37424984 |
| 79 | NC_016728 | TTTA | 3 | 123634 | 123646 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 37424984 |
| 80 | NC_016728 | TTTG | 3 | 124272 | 124283 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 37424984 |
| 81 | NC_016728 | ATTT | 3 | 124467 | 124477 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37424984 |
| 82 | NC_016728 | TTGA | 3 | 126792 | 126802 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 37424984 |
| 83 | NC_016728 | TCCA | 3 | 127041 | 127052 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 37424984 |
| 84 | NC_016728 | ATTC | 3 | 129460 | 129470 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 85 | NC_016728 | AATT | 3 | 129671 | 129681 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 86 | NC_016728 | CTTA | 3 | 131364 | 131374 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 87 | NC_016728 | TCGG | 3 | 132243 | 132253 | 11 | 0 % | 25 % | 50 % | 25 % | 9 % | Non-Coding |
| 88 | NC_016728 | CTAC | 3 | 132479 | 132490 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | Non-Coding |
| 89 | NC_016728 | CCTT | 3 | 135460 | 135470 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 90 | NC_016728 | GGAT | 3 | 135964 | 135975 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 91 | NC_016728 | AGAA | 3 | 136466 | 136478 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 92 | NC_016728 | GAGC | 3 | 139850 | 139860 | 11 | 25 % | 0 % | 50 % | 25 % | 9 % | Non-Coding |
| 93 | NC_016728 | AGAA | 4 | 141321 | 141335 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 94 | NC_016728 | TGAT | 3 | 146819 | 146831 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37424984 |
| 95 | NC_016728 | CGAT | 3 | 148915 | 148927 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37424984 |
| 96 | NC_016728 | TCTT | 3 | 151261 | 151272 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |