Tetra-nucleotide Imperfect Repeats of Silene vulgaris chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016727 | TTTA | 3 | 164 | 175 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 2 | NC_016727 | TAAA | 3 | 203 | 214 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_016727 | TACC | 3 | 585 | 595 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 37424968 |
| 4 | NC_016727 | AAGT | 3 | 1069 | 1079 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37424968 |
| 5 | NC_016727 | AAAT | 3 | 2775 | 2785 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37424968 |
| 6 | NC_016727 | ATAA | 3 | 2908 | 2919 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37424968 |
| 7 | NC_016727 | TTCT | 3 | 5970 | 5980 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 8 | NC_016727 | ATTT | 3 | 6119 | 6130 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_016727 | TAAG | 3 | 6845 | 6856 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 10 | NC_016727 | AGAT | 3 | 7363 | 7373 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 11 | NC_016727 | AAAC | 3 | 8686 | 8696 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 12 | NC_016727 | TGAA | 3 | 11526 | 11538 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 37424969 |
| 13 | NC_016727 | GAAG | 3 | 12476 | 12487 | 12 | 50 % | 0 % | 50 % | 0 % | 0 % | Non-Coding |
| 14 | NC_016727 | ACTA | 3 | 13371 | 13382 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 15 | NC_016727 | AAAT | 3 | 15236 | 15246 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 16 | NC_016727 | ATTA | 4 | 15370 | 15385 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 17 | NC_016727 | CTAT | 3 | 22408 | 22419 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37424969 |
| 18 | NC_016727 | CCTA | 3 | 23401 | 23411 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 37424969 |
| 19 | NC_016727 | CTTT | 3 | 30146 | 30157 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 20 | NC_016727 | AAAT | 3 | 30846 | 30857 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 21 | NC_016727 | GAAA | 3 | 32392 | 32403 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424970 |
| 22 | NC_016727 | GGGA | 3 | 32512 | 32523 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 37424970 |
| 23 | NC_016727 | TTGC | 3 | 32793 | 32803 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 37424970 |
| 24 | NC_016727 | TTCT | 3 | 34547 | 34558 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 25 | NC_016727 | ATTG | 3 | 36545 | 36555 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 37424970 |
| 26 | NC_016727 | TTTA | 3 | 39930 | 39941 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_016727 | AAAT | 3 | 40557 | 40568 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 28 | NC_016727 | TATT | 3 | 42922 | 42932 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 29 | NC_016727 | AGAA | 3 | 45701 | 45712 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 30 | NC_016727 | AAAC | 3 | 49996 | 50008 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | Non-Coding |
| 31 | NC_016727 | ACTG | 3 | 60107 | 60118 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 37424971 |
| 32 | NC_016727 | AAAG | 3 | 60120 | 60130 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 33 | NC_016727 | AAAT | 3 | 63577 | 63588 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_016727 | TAAA | 3 | 66089 | 66100 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37424972 |
| 35 | NC_016727 | TAAA | 3 | 66219 | 66229 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 36 | NC_016727 | TGAA | 3 | 67313 | 67324 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 37 | NC_016727 | ATTT | 3 | 68040 | 68050 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 38 | NC_016727 | AAAT | 3 | 68906 | 68916 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37424972 |
| 39 | NC_016727 | AATA | 3 | 68999 | 69010 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37424972 |
| 40 | NC_016727 | TTTC | 3 | 73224 | 73235 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 37424972 |
| 41 | NC_016727 | TAAA | 5 | 73505 | 73524 | 20 | 75 % | 25 % | 0 % | 0 % | 5 % | 37424972 |
| 42 | NC_016727 | TCGG | 3 | 74241 | 74251 | 11 | 0 % | 25 % | 50 % | 25 % | 9 % | 37424972 |
| 43 | NC_016727 | TTAA | 3 | 75140 | 75150 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 37424972 |
| 44 | NC_016727 | TTAT | 3 | 75151 | 75161 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37424972 |
| 45 | NC_016727 | TCTT | 3 | 76202 | 76213 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 37424972 |
| 46 | NC_016727 | AATC | 3 | 76580 | 76591 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 37424972 |
| 47 | NC_016727 | ATTT | 3 | 78400 | 78410 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37424972 |
| 48 | NC_016727 | AAAT | 3 | 79477 | 79487 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37424972 |
| 49 | NC_016727 | TTAA | 3 | 80729 | 80740 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37424972 |
| 50 | NC_016727 | TTCT | 3 | 85275 | 85285 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37424972 |
| 51 | NC_016727 | TTTA | 3 | 85562 | 85573 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37424972 |
| 52 | NC_016727 | ATCG | 3 | 86045 | 86057 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37424972 |
| 53 | NC_016727 | TGAT | 3 | 88278 | 88290 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37424972 |
| 54 | NC_016727 | AATA | 3 | 89128 | 89140 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 37424972 |
| 55 | NC_016727 | AATA | 3 | 90985 | 90996 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37424972 |
| 56 | NC_016727 | GCTC | 3 | 95901 | 95911 | 11 | 0 % | 25 % | 25 % | 50 % | 9 % | Non-Coding |
| 57 | NC_016727 | ATCC | 3 | 99749 | 99760 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 58 | NC_016727 | TCTA | 3 | 100134 | 100145 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 59 | NC_016727 | GAGG | 3 | 103024 | 103035 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 60 | NC_016727 | AGGT | 3 | 103235 | 103246 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | Non-Coding |
| 61 | NC_016727 | TAAG | 3 | 104355 | 104365 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 62 | NC_016727 | TGGA | 3 | 107877 | 107888 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 63 | NC_016727 | AAAT | 3 | 110586 | 110597 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 64 | NC_016727 | AAGT | 3 | 110903 | 110913 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 65 | NC_016727 | AAGA | 3 | 111969 | 111979 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 66 | NC_016727 | GAAA | 3 | 113754 | 113765 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424975 |
| 67 | NC_016727 | TAGA | 3 | 113795 | 113806 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 37424975 |
| 68 | NC_016727 | AATA | 3 | 114548 | 114558 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37424975 |
| 69 | NC_016727 | TAAA | 3 | 115728 | 115738 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 70 | NC_016727 | ATTT | 3 | 117348 | 117359 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 71 | NC_016727 | AAAT | 3 | 117905 | 117915 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 72 | NC_016727 | CCCA | 3 | 118241 | 118252 | 12 | 25 % | 0 % | 0 % | 75 % | 8 % | 37424975 |
| 73 | NC_016727 | GTTT | 3 | 118946 | 118957 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 37424975 |
| 74 | NC_016727 | ATCT | 3 | 121870 | 121881 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 75 | NC_016727 | ATGA | 3 | 122330 | 122341 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 37424976 |
| 76 | NC_016727 | ATTC | 4 | 123037 | 123051 | 15 | 25 % | 50 % | 0 % | 25 % | 6 % | 37424976 |
| 77 | NC_016727 | ATTT | 3 | 123085 | 123096 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37424976 |
| 78 | NC_016727 | TTTG | 3 | 123590 | 123601 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 37424976 |
| 79 | NC_016727 | TCCA | 3 | 125954 | 125965 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 37424976 |
| 80 | NC_016727 | AATT | 3 | 128166 | 128176 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 81 | NC_016727 | CTTA | 3 | 129477 | 129487 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 82 | NC_016727 | CTAC | 3 | 130594 | 130605 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | Non-Coding |
| 83 | NC_016727 | CCTT | 3 | 133556 | 133566 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 84 | NC_016727 | GGAT | 3 | 134082 | 134093 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 85 | NC_016727 | AGAA | 3 | 134584 | 134596 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 86 | NC_016727 | GAGC | 3 | 137931 | 137941 | 11 | 25 % | 0 % | 50 % | 25 % | 9 % | Non-Coding |
| 87 | NC_016727 | AGAA | 4 | 139397 | 139411 | 15 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 88 | NC_016727 | TGAT | 3 | 145689 | 145701 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37424976 |
| 89 | NC_016727 | CGAT | 3 | 147785 | 147797 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37424976 |