Tetra-nucleotide Imperfect Repeats of Rhynchoryza subulata plastid
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016718 | AAGT | 3 | 781 | 791 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37424960 |
2 | NC_016718 | CATT | 3 | 3686 | 3697 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
3 | NC_016718 | TGTT | 3 | 6748 | 6759 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
4 | NC_016718 | TTCT | 3 | 8068 | 8078 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
5 | NC_016718 | GAAA | 3 | 10405 | 10416 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424960 |
6 | NC_016718 | AGGG | 3 | 11525 | 11535 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | Non-Coding |
7 | NC_016718 | GTAT | 3 | 16374 | 16384 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
8 | NC_016718 | GGCA | 3 | 16602 | 16612 | 11 | 25 % | 0 % | 50 % | 25 % | 9 % | Non-Coding |
9 | NC_016718 | TTTC | 3 | 17736 | 17746 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
10 | NC_016718 | AAAG | 3 | 17857 | 17868 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
11 | NC_016718 | ATGA | 3 | 18803 | 18814 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
12 | NC_016718 | TTTC | 3 | 21026 | 21038 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 37424961 |
13 | NC_016718 | GCGA | 3 | 30088 | 30100 | 13 | 25 % | 0 % | 50 % | 25 % | 7 % | 37424961 |
14 | NC_016718 | TTAA | 3 | 30611 | 30622 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
15 | NC_016718 | GAAA | 4 | 32937 | 32952 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
16 | NC_016718 | CTTT | 3 | 33475 | 33485 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
17 | NC_016718 | TTTG | 3 | 33856 | 33866 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
18 | NC_016718 | AAAG | 3 | 34764 | 34775 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424961 |
19 | NC_016718 | TTTC | 3 | 37126 | 37136 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
20 | NC_016718 | AAGA | 3 | 40412 | 40423 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424962 |
21 | NC_016718 | CTAG | 3 | 41355 | 41367 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37424962 |
22 | NC_016718 | ATCA | 3 | 43403 | 43413 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 37424962 |
23 | NC_016718 | AAGA | 3 | 43555 | 43565 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37424962 |
24 | NC_016718 | AACA | 3 | 45844 | 45854 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
25 | NC_016718 | TTGA | 3 | 47533 | 47545 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
26 | NC_016718 | CAGA | 3 | 49214 | 49224 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 37424962 |
27 | NC_016718 | TAGG | 4 | 52473 | 52488 | 16 | 25 % | 25 % | 50 % | 0 % | 6 % | Non-Coding |
28 | NC_016718 | TTTC | 3 | 54540 | 54550 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
29 | NC_016718 | AATT | 3 | 54615 | 54626 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
30 | NC_016718 | AATA | 4 | 56897 | 56913 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | Non-Coding |
31 | NC_016718 | AAAG | 3 | 57584 | 57594 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
32 | NC_016718 | ATTC | 3 | 60771 | 60781 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
33 | NC_016718 | TATT | 3 | 66522 | 66532 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
34 | NC_016718 | GAAA | 3 | 66846 | 66857 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424964 |
35 | NC_016718 | AAAT | 3 | 68375 | 68385 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
36 | NC_016718 | CTTT | 3 | 68659 | 68669 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
37 | NC_016718 | AGAA | 3 | 69858 | 69869 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 37424964 |
38 | NC_016718 | GTTT | 3 | 69876 | 69886 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 37424964 |
39 | NC_016718 | AAAG | 3 | 69998 | 70008 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37424964 |
40 | NC_016718 | TTTA | 3 | 73204 | 73215 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 37424964 |
41 | NC_016718 | GAAA | 3 | 73313 | 73324 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424964 |
42 | NC_016718 | TTTA | 3 | 74755 | 74765 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37424964 |
43 | NC_016718 | TTTC | 3 | 75771 | 75781 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37424964 |
44 | NC_016718 | AGAA | 3 | 77713 | 77723 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37424964 |
45 | NC_016718 | TTTC | 3 | 78601 | 78611 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37424964 |
46 | NC_016718 | TATT | 3 | 81323 | 81334 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37424964 |
47 | NC_016718 | AATG | 3 | 82441 | 82451 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37424964 |
48 | NC_016718 | TTCT | 3 | 89865 | 89875 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37424964 |
49 | NC_016718 | AAAC | 3 | 94753 | 94765 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 37424968 |
50 | NC_016718 | ATCC | 3 | 94886 | 94897 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 37424968 |
51 | NC_016718 | CTAT | 3 | 95274 | 95285 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37424968 |
52 | NC_016718 | ACGG | 3 | 98144 | 98155 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | 37424968 |
53 | NC_016718 | AGGT | 3 | 98427 | 98438 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37424968 |
54 | NC_016718 | AACG | 3 | 99752 | 99763 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | 37424968 |
55 | NC_016718 | AAAG | 4 | 101079 | 101094 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 37424968 |
56 | NC_016718 | GAAT | 3 | 102663 | 102673 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37424968 |
57 | NC_016718 | AAGG | 3 | 102675 | 102686 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 37424968 |
58 | NC_016718 | CAAA | 3 | 106221 | 106232 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 37424968 |
59 | NC_016718 | TTTA | 3 | 110906 | 110917 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37424968 |
60 | NC_016718 | TATT | 3 | 110958 | 110968 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37424968 |
61 | NC_016718 | AGAA | 3 | 113002 | 113013 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424968 |
62 | NC_016718 | TAAC | 3 | 113822 | 113833 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 37424968 |
63 | NC_016718 | ATTC | 3 | 115660 | 115670 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 37424968 |
64 | NC_016718 | AAAT | 3 | 116075 | 116085 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37424968 |
65 | NC_016718 | CTTT | 4 | 117239 | 117254 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 37424968 |
66 | NC_016718 | TCGT | 3 | 118569 | 118580 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 37424968 |
67 | NC_016718 | CTTA | 3 | 118776 | 118786 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 37424968 |
68 | NC_016718 | CCGT | 3 | 120178 | 120189 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | 37424968 |
69 | NC_016718 | GGAT | 3 | 123436 | 123447 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37424968 |
70 | NC_016718 | AGAA | 3 | 128458 | 128468 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37424967 |
71 | NC_016718 | TGAA | 3 | 133075 | 133086 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
72 | NC_016718 | CATT | 3 | 135882 | 135892 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |