Tetra-nucleotide Imperfect Repeats of Rhynchoryza subulata plastid
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016718 | AAGT | 3 | 781 | 791 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37424960 |
| 2 | NC_016718 | CATT | 3 | 3686 | 3697 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 3 | NC_016718 | TGTT | 3 | 6748 | 6759 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 4 | NC_016718 | TTCT | 3 | 8068 | 8078 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 5 | NC_016718 | GAAA | 3 | 10405 | 10416 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424960 |
| 6 | NC_016718 | AGGG | 3 | 11525 | 11535 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | Non-Coding |
| 7 | NC_016718 | GTAT | 3 | 16374 | 16384 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 8 | NC_016718 | GGCA | 3 | 16602 | 16612 | 11 | 25 % | 0 % | 50 % | 25 % | 9 % | Non-Coding |
| 9 | NC_016718 | TTTC | 3 | 17736 | 17746 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 10 | NC_016718 | AAAG | 3 | 17857 | 17868 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 11 | NC_016718 | ATGA | 3 | 18803 | 18814 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 12 | NC_016718 | TTTC | 3 | 21026 | 21038 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 37424961 |
| 13 | NC_016718 | GCGA | 3 | 30088 | 30100 | 13 | 25 % | 0 % | 50 % | 25 % | 7 % | 37424961 |
| 14 | NC_016718 | TTAA | 3 | 30611 | 30622 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 15 | NC_016718 | GAAA | 4 | 32937 | 32952 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
| 16 | NC_016718 | CTTT | 3 | 33475 | 33485 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 17 | NC_016718 | TTTG | 3 | 33856 | 33866 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 18 | NC_016718 | AAAG | 3 | 34764 | 34775 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424961 |
| 19 | NC_016718 | TTTC | 3 | 37126 | 37136 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 20 | NC_016718 | AAGA | 3 | 40412 | 40423 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424962 |
| 21 | NC_016718 | CTAG | 3 | 41355 | 41367 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37424962 |
| 22 | NC_016718 | ATCA | 3 | 43403 | 43413 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 37424962 |
| 23 | NC_016718 | AAGA | 3 | 43555 | 43565 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37424962 |
| 24 | NC_016718 | AACA | 3 | 45844 | 45854 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 25 | NC_016718 | TTGA | 3 | 47533 | 47545 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 26 | NC_016718 | CAGA | 3 | 49214 | 49224 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 37424962 |
| 27 | NC_016718 | TAGG | 4 | 52473 | 52488 | 16 | 25 % | 25 % | 50 % | 0 % | 6 % | Non-Coding |
| 28 | NC_016718 | TTTC | 3 | 54540 | 54550 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 29 | NC_016718 | AATT | 3 | 54615 | 54626 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_016718 | AATA | 4 | 56897 | 56913 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | Non-Coding |
| 31 | NC_016718 | AAAG | 3 | 57584 | 57594 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 32 | NC_016718 | ATTC | 3 | 60771 | 60781 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 33 | NC_016718 | TATT | 3 | 66522 | 66532 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 34 | NC_016718 | GAAA | 3 | 66846 | 66857 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424964 |
| 35 | NC_016718 | AAAT | 3 | 68375 | 68385 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 36 | NC_016718 | CTTT | 3 | 68659 | 68669 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 37 | NC_016718 | AGAA | 3 | 69858 | 69869 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 37424964 |
| 38 | NC_016718 | GTTT | 3 | 69876 | 69886 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 37424964 |
| 39 | NC_016718 | AAAG | 3 | 69998 | 70008 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37424964 |
| 40 | NC_016718 | TTTA | 3 | 73204 | 73215 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 37424964 |
| 41 | NC_016718 | GAAA | 3 | 73313 | 73324 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424964 |
| 42 | NC_016718 | TTTA | 3 | 74755 | 74765 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37424964 |
| 43 | NC_016718 | TTTC | 3 | 75771 | 75781 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37424964 |
| 44 | NC_016718 | AGAA | 3 | 77713 | 77723 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37424964 |
| 45 | NC_016718 | TTTC | 3 | 78601 | 78611 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37424964 |
| 46 | NC_016718 | TATT | 3 | 81323 | 81334 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37424964 |
| 47 | NC_016718 | AATG | 3 | 82441 | 82451 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37424964 |
| 48 | NC_016718 | TTCT | 3 | 89865 | 89875 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37424964 |
| 49 | NC_016718 | AAAC | 3 | 94753 | 94765 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 37424968 |
| 50 | NC_016718 | ATCC | 3 | 94886 | 94897 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 37424968 |
| 51 | NC_016718 | CTAT | 3 | 95274 | 95285 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37424968 |
| 52 | NC_016718 | ACGG | 3 | 98144 | 98155 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | 37424968 |
| 53 | NC_016718 | AGGT | 3 | 98427 | 98438 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37424968 |
| 54 | NC_016718 | AACG | 3 | 99752 | 99763 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | 37424968 |
| 55 | NC_016718 | AAAG | 4 | 101079 | 101094 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 37424968 |
| 56 | NC_016718 | GAAT | 3 | 102663 | 102673 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37424968 |
| 57 | NC_016718 | AAGG | 3 | 102675 | 102686 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 37424968 |
| 58 | NC_016718 | CAAA | 3 | 106221 | 106232 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 37424968 |
| 59 | NC_016718 | TTTA | 3 | 110906 | 110917 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37424968 |
| 60 | NC_016718 | TATT | 3 | 110958 | 110968 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37424968 |
| 61 | NC_016718 | AGAA | 3 | 113002 | 113013 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37424968 |
| 62 | NC_016718 | TAAC | 3 | 113822 | 113833 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 37424968 |
| 63 | NC_016718 | ATTC | 3 | 115660 | 115670 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 37424968 |
| 64 | NC_016718 | AAAT | 3 | 116075 | 116085 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 37424968 |
| 65 | NC_016718 | CTTT | 4 | 117239 | 117254 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 37424968 |
| 66 | NC_016718 | TCGT | 3 | 118569 | 118580 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | 37424968 |
| 67 | NC_016718 | CTTA | 3 | 118776 | 118786 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 37424968 |
| 68 | NC_016718 | CCGT | 3 | 120178 | 120189 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | 37424968 |
| 69 | NC_016718 | GGAT | 3 | 123436 | 123447 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37424968 |
| 70 | NC_016718 | AGAA | 3 | 128458 | 128468 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37424967 |
| 71 | NC_016718 | TGAA | 3 | 133075 | 133086 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 72 | NC_016718 | CATT | 3 | 135882 | 135892 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |