Penta-nucleotide Imperfect Repeats of Gossypium arboreum chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016712 | CAATA | 3 | 4608 | 4623 | 16 | 60 % | 20 % | 0 % | 20 % | 6 % | Non-Coding |
2 | NC_016712 | ATTTT | 3 | 4851 | 4864 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
3 | NC_016712 | TTTTA | 3 | 4931 | 4945 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
4 | NC_016712 | CTTAT | 3 | 9782 | 9797 | 16 | 20 % | 60 % | 0 % | 20 % | 6 % | Non-Coding |
5 | NC_016712 | ATTCT | 3 | 9987 | 10000 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
6 | NC_016712 | TTTCT | 3 | 12699 | 12712 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 37229191 |
7 | NC_016712 | AAAAT | 3 | 37886 | 37900 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
8 | NC_016712 | TAATT | 3 | 44728 | 44741 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
9 | NC_016712 | AGAAT | 3 | 50632 | 50646 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
10 | NC_016712 | GTTTT | 3 | 51154 | 51167 | 14 | 0 % | 80 % | 20 % | 0 % | 7 % | Non-Coding |
11 | NC_016712 | TTATT | 3 | 51400 | 51413 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
12 | NC_016712 | ATTCT | 3 | 54163 | 54176 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
13 | NC_016712 | TAGAA | 3 | 54202 | 54215 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | Non-Coding |
14 | NC_016712 | TTAAT | 4 | 54565 | 54583 | 19 | 40 % | 60 % | 0 % | 0 % | 10 % | Non-Coding |
15 | NC_016712 | TTTCA | 3 | 58042 | 58057 | 16 | 20 % | 60 % | 0 % | 20 % | 6 % | Non-Coding |
16 | NC_016712 | TTTTC | 4 | 64494 | 64513 | 20 | 0 % | 80 % | 0 % | 20 % | 10 % | Non-Coding |
17 | NC_016712 | TTATA | 3 | 79372 | 79385 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 37229191 |
18 | NC_016712 | CACTT | 3 | 84154 | 84167 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | 37229191 |
19 | NC_016712 | TATCA | 3 | 86222 | 86237 | 16 | 40 % | 40 % | 0 % | 20 % | 6 % | 37229191 |
20 | NC_016712 | ATATG | 3 | 90645 | 90659 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 37229191 |
21 | NC_016712 | AACGG | 3 | 92229 | 92242 | 14 | 40 % | 0 % | 40 % | 20 % | 7 % | 37229191 |
22 | NC_016712 | GAAAG | 3 | 98409 | 98424 | 16 | 60 % | 0 % | 40 % | 0 % | 6 % | 37229191 |
23 | NC_016712 | TCCGG | 3 | 99276 | 99290 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 37229191 |
24 | NC_016712 | TTCTA | 5 | 104292 | 104315 | 24 | 20 % | 60 % | 0 % | 20 % | 8 % | 37229192 |
25 | NC_016712 | AAGAA | 3 | 104780 | 104794 | 15 | 80 % | 0 % | 20 % | 0 % | 0 % | 37229192 |
26 | NC_016712 | TAAAG | 4 | 109482 | 109501 | 20 | 60 % | 20 % | 20 % | 0 % | 5 % | 37229192 |
27 | NC_016712 | AGAAA | 3 | 114219 | 114234 | 16 | 80 % | 0 % | 20 % | 0 % | 6 % | 37229192 |
28 | NC_016712 | AAATA | 3 | 123826 | 123839 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 37229192 |
29 | NC_016712 | TTCTT | 3 | 126800 | 126814 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 37229192 |
30 | NC_016712 | CTATT | 3 | 130636 | 130650 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | 37229192 |
31 | NC_016712 | ACTTT | 4 | 139434 | 139453 | 20 | 20 % | 60 % | 0 % | 20 % | 5 % | 37229192 |
32 | NC_016712 | TTTCT | 3 | 144136 | 144150 | 15 | 0 % | 80 % | 0 % | 20 % | 0 % | 37229192 |
33 | NC_016712 | ACCGG | 3 | 149640 | 149654 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
34 | NC_016712 | CTTTC | 3 | 150507 | 150522 | 16 | 0 % | 60 % | 0 % | 40 % | 6 % | Non-Coding |
35 | NC_016712 | CATAC | 3 | 150917 | 150930 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |