Tetra-nucleotide Imperfect Repeats of Gossypium arboreum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016712 | AAGT | 3 | 1131 | 1141 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229183 |
| 2 | NC_016712 | AAAT | 3 | 2055 | 2066 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_016712 | ATCT | 3 | 4706 | 4717 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 4 | NC_016712 | TTCA | 3 | 4977 | 4988 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 5 | NC_016712 | AAAT | 4 | 6499 | 6514 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 6 | NC_016712 | TTTA | 3 | 6584 | 6595 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_016712 | ATAG | 3 | 8388 | 8399 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_016712 | ATTT | 3 | 8658 | 8669 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_016712 | AATC | 3 | 8746 | 8756 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 10 | NC_016712 | ATTT | 4 | 8849 | 8863 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 11 | NC_016712 | TCTA | 3 | 13497 | 13508 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 12 | NC_016712 | AAAT | 3 | 14119 | 14130 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 13 | NC_016712 | TTTA | 4 | 14748 | 14762 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 14 | NC_016712 | TTTA | 3 | 23426 | 23437 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229184 |
| 15 | NC_016712 | GATA | 3 | 27260 | 27270 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229184 |
| 16 | NC_016712 | CTAA | 3 | 29100 | 29111 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 17 | NC_016712 | GAAA | 3 | 31443 | 31454 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 18 | NC_016712 | ATCA | 3 | 31643 | 31653 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 19 | NC_016712 | TTCA | 4 | 32486 | 32501 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 20 | NC_016712 | AATA | 3 | 33532 | 33543 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 21 | NC_016712 | TCTT | 3 | 33605 | 33617 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 22 | NC_016712 | GTTT | 3 | 33943 | 33954 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 23 | NC_016712 | GAAA | 3 | 35931 | 35942 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37229185 |
| 24 | NC_016712 | TTGC | 3 | 36332 | 36342 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 37229185 |
| 25 | NC_016712 | ATCT | 3 | 37351 | 37362 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 26 | NC_016712 | AAAT | 3 | 37415 | 37426 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_016712 | TGAA | 4 | 37965 | 37979 | 15 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 28 | NC_016712 | TAAT | 3 | 38362 | 38373 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 29 | NC_016712 | AAAT | 3 | 38392 | 38404 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 30 | NC_016712 | GATC | 3 | 38989 | 38999 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 31 | NC_016712 | AATG | 3 | 42336 | 42347 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 37229185 |
| 32 | NC_016712 | ATCT | 4 | 44060 | 44075 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 33 | NC_016712 | GTAA | 3 | 46830 | 46840 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229185 |
| 34 | NC_016712 | TTTG | 3 | 48344 | 48355 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 35 | NC_016712 | AAAG | 3 | 49696 | 49707 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_016712 | CATA | 3 | 51058 | 51068 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 37 | NC_016712 | ACAT | 3 | 51352 | 51362 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 38 | NC_016712 | CAAA | 3 | 52491 | 52502 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 37229186 |
| 39 | NC_016712 | GTCT | 3 | 53101 | 53112 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 37229186 |
| 40 | NC_016712 | GTTT | 3 | 53866 | 53878 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 41 | NC_016712 | GATT | 3 | 53904 | 53915 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 42 | NC_016712 | ATTT | 3 | 54216 | 54226 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 43 | NC_016712 | AATC | 5 | 54244 | 54262 | 19 | 50 % | 25 % | 0 % | 25 % | 10 % | Non-Coding |
| 44 | NC_016712 | AGAA | 3 | 54797 | 54808 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 45 | NC_016712 | AAAG | 3 | 60601 | 60611 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 46 | NC_016712 | ATTT | 3 | 62328 | 62339 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 47 | NC_016712 | TAGT | 3 | 62352 | 62363 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 48 | NC_016712 | TTTA | 3 | 62853 | 62865 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 49 | NC_016712 | TCTA | 3 | 63392 | 63403 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 50 | NC_016712 | TTTC | 3 | 67214 | 67224 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 51 | NC_016712 | TAAA | 3 | 71826 | 71837 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37229187 |
| 52 | NC_016712 | TCAT | 3 | 73365 | 73376 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 53 | NC_016712 | GAAC | 3 | 73708 | 73719 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | Non-Coding |
| 54 | NC_016712 | TTTA | 3 | 74641 | 74652 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229191 |
| 55 | NC_016712 | TGAA | 3 | 76458 | 76468 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229191 |
| 56 | NC_016712 | TTGA | 3 | 81501 | 81513 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37229191 |
| 57 | NC_016712 | TTTC | 3 | 82436 | 82446 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229191 |
| 58 | NC_016712 | CTTT | 3 | 84375 | 84385 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229191 |
| 59 | NC_016712 | TTAA | 3 | 86502 | 86513 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37229191 |
| 60 | NC_016712 | TTTC | 3 | 86755 | 86766 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 37229191 |
| 61 | NC_016712 | AATT | 3 | 87601 | 87611 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 37229191 |
| 62 | NC_016712 | TTAT | 3 | 87738 | 87749 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229191 |
| 63 | NC_016712 | AATT | 3 | 88380 | 88391 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37229191 |
| 64 | NC_016712 | TTCT | 3 | 92388 | 92398 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229191 |
| 65 | NC_016712 | ATCG | 3 | 93146 | 93158 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37229191 |
| 66 | NC_016712 | CTTT | 3 | 93575 | 93585 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229191 |
| 67 | NC_016712 | TGAT | 3 | 95457 | 95469 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37229191 |
| 68 | NC_016712 | AATA | 3 | 96340 | 96352 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 37229191 |
| 69 | NC_016712 | TCTA | 3 | 108061 | 108072 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37229192 |
| 70 | NC_016712 | AAGG | 3 | 108210 | 108220 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 37229192 |
| 71 | NC_016712 | GAGG | 3 | 110951 | 110962 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 37229192 |
| 72 | NC_016712 | AGGT | 3 | 111163 | 111174 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37229192 |
| 73 | NC_016712 | TAAG | 3 | 112283 | 112293 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229192 |
| 74 | NC_016712 | GAGG | 3 | 115069 | 115079 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | 37229192 |
| 75 | NC_016712 | TCTT | 3 | 116462 | 116473 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 37229192 |
| 76 | NC_016712 | AGTT | 3 | 117912 | 117922 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 37229192 |
| 77 | NC_016712 | GAAT | 3 | 118070 | 118081 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 37229192 |
| 78 | NC_016712 | ATTA | 3 | 118233 | 118244 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37229192 |
| 79 | NC_016712 | AAAG | 3 | 124039 | 124050 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37229192 |
| 80 | NC_016712 | CAAA | 3 | 124859 | 124869 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 37229192 |
| 81 | NC_016712 | ATCA | 3 | 126100 | 126111 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 37229192 |
| 82 | NC_016712 | TCTT | 3 | 128327 | 128337 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229192 |
| 83 | NC_016712 | ATTT | 3 | 129874 | 129886 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 37229192 |
| 84 | NC_016712 | TGAA | 4 | 130124 | 130139 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | 37229192 |
| 85 | NC_016712 | AACA | 3 | 131194 | 131205 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 37229192 |
| 86 | NC_016712 | ATTT | 3 | 132907 | 132917 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37229192 |
| 87 | NC_016712 | ATTT | 3 | 133880 | 133892 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 37229192 |
| 88 | NC_016712 | CTTA | 3 | 136638 | 136648 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 37229192 |
| 89 | NC_016712 | CCTT | 3 | 140711 | 140721 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 37229192 |
| 90 | NC_016712 | GGAT | 3 | 141255 | 141266 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37229192 |
| 91 | NC_016712 | AATA | 4 | 145199 | 145214 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 37229192 |
| 92 | NC_016712 | TTTC | 3 | 149827 | 149838 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 93 | NC_016712 | ATCA | 3 | 153504 | 153516 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 37229191 |
| 94 | NC_016712 | TGAT | 3 | 153599 | 153611 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37229191 |
| 95 | NC_016712 | AAAG | 3 | 155346 | 155356 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37229191 |
| 96 | NC_016712 | CGAT | 3 | 155773 | 155785 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37229191 |
| 97 | NC_016712 | TATT | 3 | 156405 | 156416 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229191 |