Penta-nucleotide Imperfect Repeats of Gossypium tomentosum chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016690 | CAATA | 3 | 4622 | 4637 | 16 | 60 % | 20 % | 0 % | 20 % | 6 % | Non-Coding |
2 | NC_016690 | ATTTT | 3 | 4865 | 4878 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
3 | NC_016690 | TTTTA | 3 | 4939 | 4953 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
4 | NC_016690 | CTTAT | 3 | 9811 | 9826 | 16 | 20 % | 60 % | 0 % | 20 % | 6 % | Non-Coding |
5 | NC_016690 | ATTCT | 3 | 10011 | 10024 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
6 | NC_016690 | TTTCT | 3 | 12744 | 12757 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 37229144 |
7 | NC_016690 | TAATT | 3 | 44864 | 44877 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
8 | NC_016690 | TATTT | 3 | 50721 | 50735 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
9 | NC_016690 | AGAAT | 3 | 50820 | 50834 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
10 | NC_016690 | GTTTT | 3 | 51342 | 51355 | 14 | 0 % | 80 % | 20 % | 0 % | 7 % | Non-Coding |
11 | NC_016690 | TTATT | 3 | 51588 | 51601 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
12 | NC_016690 | ATTCT | 3 | 54352 | 54365 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
13 | NC_016690 | TAGAA | 3 | 54391 | 54404 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | Non-Coding |
14 | NC_016690 | TTAAT | 4 | 54754 | 54772 | 19 | 40 % | 60 % | 0 % | 0 % | 10 % | Non-Coding |
15 | NC_016690 | TTTCA | 3 | 58229 | 58244 | 16 | 20 % | 60 % | 0 % | 20 % | 6 % | Non-Coding |
16 | NC_016690 | TTTTC | 4 | 64692 | 64711 | 20 | 0 % | 80 % | 0 % | 20 % | 10 % | Non-Coding |
17 | NC_016690 | TTATA | 3 | 79578 | 79591 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 37229143 |
18 | NC_016690 | CACTT | 3 | 84367 | 84380 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | 37229143 |
19 | NC_016690 | TATCA | 3 | 86434 | 86449 | 16 | 40 % | 40 % | 0 % | 20 % | 6 % | 37229143 |
20 | NC_016690 | ATATG | 3 | 90851 | 90865 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 37229143 |
21 | NC_016690 | AACGG | 3 | 92435 | 92448 | 14 | 40 % | 0 % | 40 % | 20 % | 7 % | 37229143 |
22 | NC_016690 | GAAAG | 3 | 98615 | 98630 | 16 | 60 % | 0 % | 40 % | 0 % | 6 % | 37229143 |
23 | NC_016690 | TCCGG | 3 | 99482 | 99496 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 37229143 |
24 | NC_016690 | TTCTA | 5 | 104504 | 104527 | 24 | 20 % | 60 % | 0 % | 20 % | 8 % | 37229142 |
25 | NC_016690 | TAAAG | 5 | 109690 | 109714 | 25 | 60 % | 20 % | 20 % | 0 % | 8 % | 37229142 |
26 | NC_016690 | AGAAA | 3 | 114427 | 114442 | 16 | 80 % | 0 % | 20 % | 0 % | 6 % | 37229142 |
27 | NC_016690 | AAATA | 3 | 124028 | 124041 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 37229142 |
28 | NC_016690 | TTCTT | 3 | 127002 | 127016 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 37229142 |
29 | NC_016690 | CTATT | 3 | 130837 | 130851 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | 37229142 |
30 | NC_016690 | ATATT | 3 | 131848 | 131862 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | 37229142 |
31 | NC_016690 | ACTTT | 4 | 139634 | 139653 | 20 | 20 % | 60 % | 0 % | 20 % | 5 % | 37229142 |
32 | NC_016690 | ACCGG | 3 | 149847 | 149861 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
33 | NC_016690 | CTTTC | 3 | 150714 | 150729 | 16 | 0 % | 60 % | 0 % | 40 % | 6 % | Non-Coding |
34 | NC_016690 | CATAC | 3 | 151124 | 151137 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |