Tetra-nucleotide Imperfect Repeats of Gossypium tomentosum chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016690 | AAGT | 3 | 1131 | 1141 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229136 |
| 2 | NC_016690 | ATTT | 3 | 1658 | 1668 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 3 | NC_016690 | AAAT | 3 | 2061 | 2072 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_016690 | ATCT | 3 | 4720 | 4731 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 5 | NC_016690 | TTCA | 3 | 4985 | 4996 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 6 | NC_016690 | AAAT | 4 | 6507 | 6522 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 7 | NC_016690 | TTTA | 3 | 6592 | 6603 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_016690 | ATAG | 3 | 8400 | 8411 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 9 | NC_016690 | ATTT | 3 | 8670 | 8681 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 10 | NC_016690 | AATC | 3 | 8758 | 8768 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 11 | NC_016690 | ATTT | 4 | 8861 | 8875 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 12 | NC_016690 | TCTA | 3 | 13542 | 13553 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 13 | NC_016690 | AAAT | 3 | 14164 | 14175 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 14 | NC_016690 | TTTA | 4 | 14791 | 14805 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 15 | NC_016690 | TTTA | 3 | 23470 | 23481 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229137 |
| 16 | NC_016690 | GATA | 3 | 27304 | 27314 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229137 |
| 17 | NC_016690 | CTAA | 3 | 29142 | 29153 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 18 | NC_016690 | GAAA | 3 | 31479 | 31490 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 19 | NC_016690 | ATCA | 3 | 31679 | 31689 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 20 | NC_016690 | TTCA | 4 | 32522 | 32537 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 21 | NC_016690 | AATA | 3 | 33577 | 33588 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 22 | NC_016690 | TCTT | 3 | 33655 | 33667 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 23 | NC_016690 | GTTT | 3 | 33993 | 34004 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 24 | NC_016690 | GAAA | 3 | 35992 | 36003 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37229138 |
| 25 | NC_016690 | TTGC | 3 | 36393 | 36403 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 37229138 |
| 26 | NC_016690 | ATCT | 3 | 37412 | 37423 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 27 | NC_016690 | AAAT | 3 | 37476 | 37487 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 28 | NC_016690 | TGAA | 4 | 38027 | 38041 | 15 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 29 | NC_016690 | TAAT | 3 | 38491 | 38502 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_016690 | AAAT | 3 | 38521 | 38533 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 31 | NC_016690 | GATC | 3 | 39119 | 39129 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 32 | NC_016690 | AATG | 3 | 42466 | 42477 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 37229138 |
| 33 | NC_016690 | ATCT | 4 | 44190 | 44205 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 34 | NC_016690 | GTAA | 3 | 46975 | 46985 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229138 |
| 35 | NC_016690 | TTTG | 3 | 48500 | 48511 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_016690 | ATAG | 3 | 48641 | 48652 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 37 | NC_016690 | TAAA | 4 | 48684 | 48699 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 38 | NC_016690 | AAAG | 3 | 49886 | 49897 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 39 | NC_016690 | ACAT | 3 | 51540 | 51550 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 40 | NC_016690 | CAAA | 3 | 52679 | 52690 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 37229138 |
| 41 | NC_016690 | GTCT | 3 | 53290 | 53301 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 37229139 |
| 42 | NC_016690 | GTTT | 3 | 54055 | 54067 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 43 | NC_016690 | GATT | 3 | 54093 | 54104 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 44 | NC_016690 | AATC | 5 | 54433 | 54451 | 19 | 50 % | 25 % | 0 % | 25 % | 10 % | Non-Coding |
| 45 | NC_016690 | AGAA | 3 | 54986 | 54997 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 46 | NC_016690 | AAAG | 3 | 60800 | 60810 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 47 | NC_016690 | TAGT | 3 | 62551 | 62562 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 48 | NC_016690 | TTTA | 3 | 63052 | 63064 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 49 | NC_016690 | TCTA | 3 | 63591 | 63602 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 50 | NC_016690 | TAAA | 3 | 72037 | 72048 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37229140 |
| 51 | NC_016690 | TCAT | 3 | 73583 | 73594 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 52 | NC_016690 | GAAC | 3 | 73926 | 73937 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | Non-Coding |
| 53 | NC_016690 | TTTA | 3 | 74854 | 74865 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229143 |
| 54 | NC_016690 | TGAA | 3 | 76664 | 76674 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229143 |
| 55 | NC_016690 | TTGA | 3 | 81714 | 81726 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37229143 |
| 56 | NC_016690 | TTTC | 3 | 82649 | 82659 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229143 |
| 57 | NC_016690 | CTTT | 3 | 84588 | 84598 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229143 |
| 58 | NC_016690 | TTAA | 3 | 86719 | 86730 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37229143 |
| 59 | NC_016690 | TTTC | 3 | 86972 | 86983 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 37229143 |
| 60 | NC_016690 | AATT | 3 | 87812 | 87822 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 37229143 |
| 61 | NC_016690 | TTAT | 3 | 87949 | 87960 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229143 |
| 62 | NC_016690 | AATT | 3 | 88591 | 88602 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37229143 |
| 63 | NC_016690 | TTCT | 3 | 92594 | 92604 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229143 |
| 64 | NC_016690 | ATCG | 3 | 93352 | 93364 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37229143 |
| 65 | NC_016690 | CTTT | 3 | 93781 | 93791 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229143 |
| 66 | NC_016690 | TGAT | 3 | 95657 | 95669 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37229143 |
| 67 | NC_016690 | AATA | 3 | 96540 | 96552 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 37229143 |
| 68 | NC_016690 | TCTA | 3 | 108274 | 108285 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37229142 |
| 69 | NC_016690 | AAGG | 3 | 108423 | 108433 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 37229142 |
| 70 | NC_016690 | GAGG | 3 | 111164 | 111175 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 37229142 |
| 71 | NC_016690 | AGGT | 3 | 111376 | 111387 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37229142 |
| 72 | NC_016690 | TAAG | 3 | 112496 | 112506 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229142 |
| 73 | NC_016690 | GAGG | 3 | 115277 | 115287 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | 37229142 |
| 74 | NC_016690 | TCTT | 3 | 116664 | 116675 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 37229142 |
| 75 | NC_016690 | AGTT | 3 | 118114 | 118124 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 37229142 |
| 76 | NC_016690 | GAAT | 3 | 118272 | 118283 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 37229142 |
| 77 | NC_016690 | ATTA | 3 | 118435 | 118446 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37229142 |
| 78 | NC_016690 | AAAG | 3 | 124241 | 124252 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37229142 |
| 79 | NC_016690 | CAAA | 3 | 125061 | 125071 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 37229142 |
| 80 | NC_016690 | ATCA | 3 | 126302 | 126313 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 37229142 |
| 81 | NC_016690 | TCTT | 3 | 128529 | 128539 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229142 |
| 82 | NC_016690 | ATTT | 3 | 130082 | 130094 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 37229142 |
| 83 | NC_016690 | TGAA | 4 | 130326 | 130341 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | 37229142 |
| 84 | NC_016690 | AACA | 3 | 131400 | 131411 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 37229142 |
| 85 | NC_016690 | ATTT | 3 | 133107 | 133117 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37229142 |
| 86 | NC_016690 | ATTT | 3 | 134086 | 134098 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 37229142 |
| 87 | NC_016690 | CTTA | 3 | 136838 | 136848 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 37229142 |
| 88 | NC_016690 | CCTT | 3 | 140911 | 140921 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 37229142 |
| 89 | NC_016690 | GGAT | 3 | 141455 | 141466 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37229142 |
| 90 | NC_016690 | AATA | 3 | 145410 | 145421 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37229142 |
| 91 | NC_016690 | TTTC | 3 | 150034 | 150045 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 92 | NC_016690 | ATCA | 3 | 153717 | 153729 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 37229144 |
| 93 | NC_016690 | TGAT | 3 | 153812 | 153824 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37229144 |
| 94 | NC_016690 | AAAG | 3 | 155553 | 155563 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37229144 |
| 95 | NC_016690 | CGAT | 3 | 155980 | 155992 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37229144 |
| 96 | NC_016690 | TATT | 3 | 156612 | 156623 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229144 |