Penta-nucleotide Imperfect Repeats of Gossypium darwinii chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016670 | CAATA | 3 | 4629 | 4644 | 16 | 60 % | 20 % | 0 % | 20 % | 6 % | Non-Coding |
2 | NC_016670 | ATTTT | 3 | 4872 | 4885 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
3 | NC_016670 | TTTTA | 3 | 4946 | 4960 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
4 | NC_016670 | CTTAT | 3 | 9814 | 9829 | 16 | 20 % | 60 % | 0 % | 20 % | 6 % | Non-Coding |
5 | NC_016670 | ATTCT | 3 | 10014 | 10027 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
6 | NC_016670 | TTTCT | 3 | 12747 | 12760 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 37229108 |
7 | NC_016670 | TTTTA | 3 | 30035 | 30049 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
8 | NC_016670 | TAATT | 3 | 44871 | 44884 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
9 | NC_016670 | TATTT | 3 | 50698 | 50712 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
10 | NC_016670 | AGAAT | 3 | 50797 | 50811 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
11 | NC_016670 | GTTTT | 3 | 51319 | 51332 | 14 | 0 % | 80 % | 20 % | 0 % | 7 % | Non-Coding |
12 | NC_016670 | TTATT | 3 | 51565 | 51578 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
13 | NC_016670 | ATTCT | 3 | 54330 | 54343 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
14 | NC_016670 | TAGAA | 3 | 54369 | 54382 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | Non-Coding |
15 | NC_016670 | TTAAT | 4 | 54732 | 54750 | 19 | 40 % | 60 % | 0 % | 0 % | 10 % | Non-Coding |
16 | NC_016670 | TTTCA | 3 | 58213 | 58228 | 16 | 20 % | 60 % | 0 % | 20 % | 6 % | Non-Coding |
17 | NC_016670 | TTTTC | 4 | 64670 | 64689 | 20 | 0 % | 80 % | 0 % | 20 % | 10 % | Non-Coding |
18 | NC_016670 | TTATA | 3 | 79557 | 79570 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 37229107 |
19 | NC_016670 | CACTT | 3 | 84346 | 84359 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | 37229107 |
20 | NC_016670 | TATCA | 3 | 86413 | 86428 | 16 | 40 % | 40 % | 0 % | 20 % | 6 % | 37229107 |
21 | NC_016670 | ATATG | 3 | 90825 | 90839 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 37229107 |
22 | NC_016670 | AACGG | 3 | 92409 | 92422 | 14 | 40 % | 0 % | 40 % | 20 % | 7 % | 37229107 |
23 | NC_016670 | GAAAG | 3 | 98589 | 98604 | 16 | 60 % | 0 % | 40 % | 0 % | 6 % | 37229107 |
24 | NC_016670 | TCCGG | 3 | 99456 | 99470 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 37229107 |
25 | NC_016670 | TTCTA | 5 | 104472 | 104495 | 24 | 20 % | 60 % | 0 % | 20 % | 8 % | 37229109 |
26 | NC_016670 | TAAAG | 5 | 109652 | 109676 | 25 | 60 % | 20 % | 20 % | 0 % | 8 % | 37229109 |
27 | NC_016670 | AGAAA | 3 | 114389 | 114404 | 16 | 80 % | 0 % | 20 % | 0 % | 6 % | 37229109 |
28 | NC_016670 | AAATA | 3 | 123985 | 123998 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 37229109 |
29 | NC_016670 | TTCTT | 3 | 126960 | 126974 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 37229109 |
30 | NC_016670 | CTATT | 3 | 130795 | 130809 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | 37229109 |
31 | NC_016670 | ATATT | 3 | 131805 | 131819 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | 37229109 |
32 | NC_016670 | ACTTT | 4 | 139591 | 139610 | 20 | 20 % | 60 % | 0 % | 20 % | 5 % | 37229109 |
33 | NC_016670 | ACCGG | 3 | 149792 | 149806 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
34 | NC_016670 | CTTTC | 3 | 150659 | 150674 | 16 | 0 % | 60 % | 0 % | 40 % | 6 % | Non-Coding |
35 | NC_016670 | CATAC | 3 | 151069 | 151082 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |