Tetra-nucleotide Imperfect Repeats of Gossypium darwinii chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016670 | AAGT | 3 | 1138 | 1148 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229101 |
| 2 | NC_016670 | AAAT | 3 | 2068 | 2079 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_016670 | ATCT | 3 | 4727 | 4738 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 4 | NC_016670 | TTCA | 3 | 4992 | 5003 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 5 | NC_016670 | AAAT | 4 | 6515 | 6530 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 6 | NC_016670 | ATAG | 3 | 8403 | 8414 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 7 | NC_016670 | AATC | 3 | 8761 | 8771 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 8 | NC_016670 | ATTT | 4 | 8864 | 8878 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 9 | NC_016670 | TCTA | 3 | 13545 | 13556 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 10 | NC_016670 | AAAT | 3 | 14166 | 14177 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 11 | NC_016670 | TTTA | 4 | 14788 | 14802 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 12 | NC_016670 | TTTA | 3 | 23457 | 23468 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229102 |
| 13 | NC_016670 | GATA | 3 | 27291 | 27301 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229102 |
| 14 | NC_016670 | CTAA | 3 | 29127 | 29138 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 15 | NC_016670 | GAAA | 3 | 31516 | 31527 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 16 | NC_016670 | ATCA | 3 | 31716 | 31726 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 17 | NC_016670 | TTCA | 4 | 32559 | 32574 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 18 | NC_016670 | AATA | 3 | 33614 | 33625 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 19 | NC_016670 | TCTT | 3 | 33692 | 33704 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 20 | NC_016670 | GTTT | 3 | 34030 | 34041 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 21 | NC_016670 | GAAA | 3 | 36029 | 36040 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37229102 |
| 22 | NC_016670 | TTGC | 3 | 36430 | 36440 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 37229102 |
| 23 | NC_016670 | ATCT | 3 | 37449 | 37460 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 24 | NC_016670 | AAAT | 3 | 37513 | 37524 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_016670 | TGAA | 4 | 38064 | 38078 | 15 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 26 | NC_016670 | TAAT | 3 | 38509 | 38520 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_016670 | AAAT | 3 | 38539 | 38551 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 28 | NC_016670 | GATC | 3 | 39137 | 39147 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 29 | NC_016670 | AATG | 3 | 42484 | 42495 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 37229103 |
| 30 | NC_016670 | ATCT | 4 | 44208 | 44223 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 31 | NC_016670 | GTAA | 3 | 46968 | 46978 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229103 |
| 32 | NC_016670 | TTTG | 3 | 48488 | 48499 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 33 | NC_016670 | ATAG | 3 | 48618 | 48629 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 34 | NC_016670 | TAAA | 4 | 48661 | 48676 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 35 | NC_016670 | AAAG | 3 | 49863 | 49874 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_016670 | CATA | 3 | 51223 | 51233 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 37 | NC_016670 | ACAT | 3 | 51517 | 51527 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 38 | NC_016670 | CAAA | 3 | 52656 | 52667 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 37229103 |
| 39 | NC_016670 | GTCT | 3 | 53267 | 53278 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 37229103 |
| 40 | NC_016670 | GTTT | 3 | 54032 | 54044 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 41 | NC_016670 | GATT | 3 | 54070 | 54081 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 42 | NC_016670 | AATC | 5 | 54411 | 54429 | 19 | 50 % | 25 % | 0 % | 25 % | 10 % | Non-Coding |
| 43 | NC_016670 | AGAA | 3 | 54964 | 54975 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 44 | NC_016670 | AAAG | 3 | 60777 | 60787 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 45 | NC_016670 | ATTT | 3 | 62504 | 62515 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 46 | NC_016670 | TAGT | 3 | 62528 | 62539 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 47 | NC_016670 | TTTA | 3 | 63029 | 63041 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 48 | NC_016670 | TCTA | 3 | 63568 | 63579 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 49 | NC_016670 | TAAA | 3 | 72017 | 72028 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37229105 |
| 50 | NC_016670 | TCAT | 3 | 73563 | 73574 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 51 | NC_016670 | GAAC | 3 | 73906 | 73917 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | Non-Coding |
| 52 | NC_016670 | TTTA | 3 | 74834 | 74845 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229107 |
| 53 | NC_016670 | TGAA | 3 | 76643 | 76653 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229107 |
| 54 | NC_016670 | TTGA | 3 | 81693 | 81705 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37229107 |
| 55 | NC_016670 | TTTC | 3 | 82628 | 82638 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229107 |
| 56 | NC_016670 | CTTT | 3 | 84567 | 84577 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229107 |
| 57 | NC_016670 | TTAA | 3 | 86698 | 86709 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37229107 |
| 58 | NC_016670 | TTTC | 3 | 86951 | 86962 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 37229107 |
| 59 | NC_016670 | AATT | 3 | 87786 | 87796 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 37229107 |
| 60 | NC_016670 | TTAT | 3 | 87923 | 87934 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229107 |
| 61 | NC_016670 | AATT | 3 | 88565 | 88576 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37229107 |
| 62 | NC_016670 | TTCT | 3 | 92568 | 92578 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229107 |
| 63 | NC_016670 | ATCG | 3 | 93326 | 93338 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37229107 |
| 64 | NC_016670 | CTTT | 3 | 93755 | 93765 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229107 |
| 65 | NC_016670 | TGAT | 3 | 95631 | 95643 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37229107 |
| 66 | NC_016670 | AATA | 3 | 96514 | 96526 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 37229107 |
| 67 | NC_016670 | TCTA | 3 | 108236 | 108247 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37229109 |
| 68 | NC_016670 | AAGG | 3 | 108385 | 108395 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 37229109 |
| 69 | NC_016670 | GAGG | 3 | 111126 | 111137 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 37229109 |
| 70 | NC_016670 | AGGT | 3 | 111338 | 111349 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37229109 |
| 71 | NC_016670 | TAAG | 3 | 112458 | 112468 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229109 |
| 72 | NC_016670 | GAGG | 3 | 115239 | 115249 | 11 | 25 % | 0 % | 75 % | 0 % | 9 % | 37229109 |
| 73 | NC_016670 | TCTT | 3 | 116620 | 116631 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 37229109 |
| 74 | NC_016670 | AGTT | 3 | 118070 | 118080 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 37229109 |
| 75 | NC_016670 | GAAT | 3 | 118228 | 118239 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 37229109 |
| 76 | NC_016670 | ATTA | 3 | 118391 | 118402 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37229109 |
| 77 | NC_016670 | AAAG | 3 | 124198 | 124209 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37229109 |
| 78 | NC_016670 | CAAA | 3 | 125018 | 125028 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 37229109 |
| 79 | NC_016670 | ATCA | 3 | 126260 | 126271 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 37229109 |
| 80 | NC_016670 | TCTT | 3 | 128487 | 128497 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229109 |
| 81 | NC_016670 | ATTT | 3 | 130040 | 130052 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 37229109 |
| 82 | NC_016670 | TGAA | 4 | 130284 | 130299 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | 37229109 |
| 83 | NC_016670 | AACA | 3 | 131358 | 131369 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 37229109 |
| 84 | NC_016670 | ATTT | 3 | 133064 | 133074 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37229109 |
| 85 | NC_016670 | ATTT | 3 | 134043 | 134055 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 37229109 |
| 86 | NC_016670 | CTTA | 3 | 136795 | 136805 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 37229109 |
| 87 | NC_016670 | CCTT | 3 | 140868 | 140878 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 37229109 |
| 88 | NC_016670 | GGAT | 3 | 141412 | 141423 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37229109 |
| 89 | NC_016670 | AATA | 4 | 145351 | 145366 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 37229109 |
| 90 | NC_016670 | TTTC | 3 | 149979 | 149990 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 91 | NC_016670 | ATCA | 3 | 153662 | 153674 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 37229108 |
| 92 | NC_016670 | TGAT | 3 | 153757 | 153769 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37229108 |
| 93 | NC_016670 | AAAG | 3 | 155498 | 155508 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37229108 |
| 94 | NC_016670 | CGAT | 3 | 155925 | 155937 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37229108 |
| 95 | NC_016670 | TATT | 3 | 156557 | 156568 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229108 |