Tetra-nucleotide Imperfect Repeats of Gossypium raimondii chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016668 | AAGT | 3 | 1131 | 1141 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229099 |
| 2 | NC_016668 | ATCT | 3 | 4648 | 4659 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 3 | NC_016668 | TTCA | 3 | 4907 | 4918 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 4 | NC_016668 | AAAT | 4 | 6429 | 6444 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 5 | NC_016668 | ATAG | 3 | 8344 | 8355 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 6 | NC_016668 | ATTT | 3 | 8609 | 8619 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 7 | NC_016668 | AATC | 3 | 8696 | 8706 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 8 | NC_016668 | TCTA | 3 | 13447 | 13458 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 9 | NC_016668 | AAAT | 3 | 14094 | 14105 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 10 | NC_016668 | TTTA | 4 | 14707 | 14721 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 11 | NC_016668 | TAAA | 3 | 16071 | 16081 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_016668 | TTTA | 3 | 23338 | 23349 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229092 |
| 13 | NC_016668 | GATA | 3 | 27188 | 27198 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229092 |
| 14 | NC_016668 | CTAA | 3 | 29036 | 29047 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 15 | NC_016668 | GAAA | 3 | 31378 | 31389 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 16 | NC_016668 | ATCA | 3 | 31578 | 31588 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 17 | NC_016668 | TTCA | 4 | 32428 | 32443 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 18 | NC_016668 | AATA | 3 | 33456 | 33467 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 19 | NC_016668 | TCTT | 3 | 33534 | 33546 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 20 | NC_016668 | GTTT | 3 | 33872 | 33883 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 21 | NC_016668 | GAAA | 3 | 35867 | 35878 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37229092 |
| 22 | NC_016668 | TTGC | 3 | 36268 | 36278 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 37229092 |
| 23 | NC_016668 | ATCT | 3 | 37303 | 37314 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 24 | NC_016668 | AAAT | 3 | 37367 | 37378 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_016668 | TGAA | 4 | 37919 | 37933 | 15 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 26 | NC_016668 | GATC | 3 | 38893 | 38903 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 27 | NC_016668 | AATG | 3 | 42240 | 42251 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 37229093 |
| 28 | NC_016668 | ATCT | 4 | 43964 | 43979 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 29 | NC_016668 | GTAA | 3 | 46716 | 46726 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229093 |
| 30 | NC_016668 | AAAG | 3 | 49578 | 49589 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 31 | NC_016668 | CATA | 3 | 50958 | 50968 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 32 | NC_016668 | ACAT | 3 | 51253 | 51263 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 33 | NC_016668 | CAAA | 3 | 52378 | 52389 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 37229093 |
| 34 | NC_016668 | GTAC | 3 | 52645 | 52655 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 37229093 |
| 35 | NC_016668 | GTCT | 3 | 52986 | 52997 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 37229093 |
| 36 | NC_016668 | GATT | 3 | 53789 | 53800 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 37 | NC_016668 | ATTT | 3 | 54101 | 54111 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 38 | NC_016668 | AGAA | 3 | 54685 | 54696 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 39 | NC_016668 | ATTT | 3 | 58111 | 58121 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 40 | NC_016668 | ATTT | 9 | 58268 | 58304 | 37 | 25 % | 75 % | 0 % | 0 % | 10 % | Non-Coding |
| 41 | NC_016668 | AAAG | 3 | 60589 | 60599 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 42 | NC_016668 | TAGT | 3 | 62335 | 62346 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 43 | NC_016668 | TCTA | 3 | 63376 | 63387 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 44 | NC_016668 | CTTT | 3 | 65844 | 65855 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 45 | NC_016668 | TTTC | 3 | 67202 | 67212 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 46 | NC_016668 | TACA | 3 | 71806 | 71817 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 37229095 |
| 47 | NC_016668 | TAAA | 3 | 71831 | 71842 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 37229095 |
| 48 | NC_016668 | TCAT | 3 | 73377 | 73388 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 49 | NC_016668 | GAAC | 3 | 73720 | 73731 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | Non-Coding |
| 50 | NC_016668 | TTTA | 3 | 74655 | 74666 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229098 |
| 51 | NC_016668 | TTGA | 3 | 81535 | 81547 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37229098 |
| 52 | NC_016668 | TTTC | 3 | 82469 | 82479 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229098 |
| 53 | NC_016668 | TTTC | 3 | 86758 | 86769 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 37229098 |
| 54 | NC_016668 | AATT | 3 | 87603 | 87613 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 37229098 |
| 55 | NC_016668 | TTAT | 3 | 87740 | 87751 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229098 |
| 56 | NC_016668 | AATT | 3 | 88382 | 88393 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37229098 |
| 57 | NC_016668 | TTCT | 3 | 92393 | 92403 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229098 |
| 58 | NC_016668 | ATCG | 3 | 93151 | 93163 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37229098 |
| 59 | NC_016668 | CTTT | 3 | 93580 | 93590 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229098 |
| 60 | NC_016668 | TGAT | 3 | 95462 | 95474 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37229098 |
| 61 | NC_016668 | AATA | 3 | 96345 | 96357 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 37229098 |
| 62 | NC_016668 | TCTA | 3 | 108056 | 108067 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 37229099 |
| 63 | NC_016668 | AAGG | 3 | 108205 | 108215 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 37229099 |
| 64 | NC_016668 | GAGG | 3 | 110934 | 110945 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 37229099 |
| 65 | NC_016668 | AGGT | 3 | 111146 | 111157 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37229099 |
| 66 | NC_016668 | TAAG | 3 | 112266 | 112276 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 37229099 |
| 67 | NC_016668 | ATTT | 3 | 113362 | 113372 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37229099 |
| 68 | NC_016668 | TCTT | 3 | 116440 | 116451 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 37229099 |
| 69 | NC_016668 | AGTT | 3 | 117890 | 117900 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 37229099 |
| 70 | NC_016668 | GAAT | 3 | 118048 | 118059 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 37229099 |
| 71 | NC_016668 | ATTA | 3 | 118211 | 118222 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 37229099 |
| 72 | NC_016668 | AAAG | 3 | 124005 | 124016 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 37229099 |
| 73 | NC_016668 | CAAA | 3 | 124825 | 124835 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 37229099 |
| 74 | NC_016668 | ATCA | 3 | 126070 | 126081 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 37229099 |
| 75 | NC_016668 | TCTT | 3 | 128302 | 128312 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 37229099 |
| 76 | NC_016668 | ATTT | 3 | 129854 | 129866 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 37229099 |
| 77 | NC_016668 | TGAA | 4 | 130094 | 130109 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | 37229099 |
| 78 | NC_016668 | TTAA | 3 | 130619 | 130629 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 37229099 |
| 79 | NC_016668 | AACA | 3 | 131157 | 131168 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 37229099 |
| 80 | NC_016668 | ATTT | 3 | 132846 | 132856 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 37229099 |
| 81 | NC_016668 | ATTT | 3 | 133825 | 133837 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 37229099 |
| 82 | NC_016668 | CTTA | 3 | 136540 | 136550 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 37229099 |
| 83 | NC_016668 | CCTT | 3 | 140601 | 140611 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 37229099 |
| 84 | NC_016668 | GGAT | 3 | 141144 | 141155 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 37229099 |
| 85 | NC_016668 | TTTC | 3 | 149712 | 149723 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 86 | NC_016668 | ATCA | 3 | 153384 | 153396 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 37229098 |
| 87 | NC_016668 | TGAT | 3 | 153479 | 153491 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 37229098 |
| 88 | NC_016668 | AAAG | 3 | 155226 | 155236 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 37229098 |
| 89 | NC_016668 | CGAT | 3 | 155653 | 155665 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 37229098 |
| 90 | NC_016668 | TATT | 3 | 156285 | 156296 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 37229098 |