Tetra-nucleotide Imperfect Repeats of Brassica juncea mitochondrion
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016123 | GAAA | 3 | 507 | 518 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 35353133 |
| 2 | NC_016123 | ATCT | 3 | 2551 | 2561 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 35353133 |
| 3 | NC_016123 | CTTT | 3 | 3960 | 3971 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 35353133 |
| 4 | NC_016123 | TCAA | 3 | 3976 | 3988 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 35353133 |
| 5 | NC_016123 | TCAA | 3 | 7892 | 7904 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 35353133 |
| 6 | NC_016123 | AAGC | 3 | 15132 | 15143 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | 35353133 |
| 7 | NC_016123 | AAGA | 4 | 15389 | 15404 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 35353133 |
| 8 | NC_016123 | TTTA | 3 | 15546 | 15557 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 35353133 |
| 9 | NC_016123 | CTAT | 3 | 17537 | 17548 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35353133 |
| 10 | NC_016123 | GCCA | 3 | 19458 | 19468 | 11 | 25 % | 0 % | 25 % | 50 % | 9 % | 35353133 |
| 11 | NC_016123 | TTCC | 3 | 23052 | 23062 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 35353133 |
| 12 | NC_016123 | GGTC | 3 | 23440 | 23451 | 12 | 0 % | 25 % | 50 % | 25 % | 8 % | 35353133 |
| 13 | NC_016123 | CTTT | 3 | 24283 | 24294 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35353133 |
| 14 | NC_016123 | GAAT | 3 | 25353 | 25364 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35353133 |
| 15 | NC_016123 | AGAA | 3 | 25771 | 25783 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 35353133 |
| 16 | NC_016123 | GCAT | 3 | 33830 | 33841 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 35353133 |
| 17 | NC_016123 | AGCT | 3 | 35159 | 35169 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 35353133 |
| 18 | NC_016123 | GTAG | 3 | 38769 | 38780 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 35353133 |
| 19 | NC_016123 | AAGA | 3 | 41101 | 41112 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 35353133 |
| 20 | NC_016123 | CATT | 3 | 42222 | 42233 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35353133 |
| 21 | NC_016123 | CATT | 3 | 42664 | 42675 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35353133 |
| 22 | NC_016123 | AGTG | 3 | 43634 | 43645 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 35353133 |
| 23 | NC_016123 | GCAA | 3 | 46814 | 46824 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 35353133 |
| 24 | NC_016123 | TCAT | 3 | 48195 | 48206 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 35353133 |
| 25 | NC_016123 | AAAG | 3 | 50469 | 50480 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 35353133 |
| 26 | NC_016123 | GCTA | 3 | 54163 | 54174 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 35353133 |
| 27 | NC_016123 | AAGA | 3 | 56091 | 56102 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 35353133 |
| 28 | NC_016123 | TGAA | 3 | 61916 | 61927 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35353133 |
| 29 | NC_016123 | AAAG | 3 | 74202 | 74213 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 35353133 |
| 30 | NC_016123 | CATT | 3 | 75407 | 75418 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 35353133 |
| 31 | NC_016123 | GATT | 3 | 82607 | 82618 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 35353133 |
| 32 | NC_016123 | GAAA | 3 | 83149 | 83160 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 35353133 |
| 33 | NC_016123 | TTCT | 3 | 87364 | 87375 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35353133 |
| 34 | NC_016123 | CTTT | 3 | 89441 | 89453 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 35353133 |
| 35 | NC_016123 | CCAA | 3 | 89969 | 89980 | 12 | 50 % | 0 % | 0 % | 50 % | 8 % | 35353133 |
| 36 | NC_016123 | TTTA | 3 | 90297 | 90308 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 35353133 |
| 37 | NC_016123 | TTCT | 3 | 96011 | 96023 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 35353133 |
| 38 | NC_016123 | ATAG | 3 | 98576 | 98586 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 35353133 |
| 39 | NC_016123 | AAGA | 3 | 99220 | 99232 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 35353133 |
| 40 | NC_016123 | TTTG | 3 | 99547 | 99557 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 35353133 |
| 41 | NC_016123 | TCAT | 3 | 102513 | 102523 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 35353133 |
| 42 | NC_016123 | CTTC | 3 | 103428 | 103439 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | 35353133 |
| 43 | NC_016123 | TCTT | 3 | 105913 | 105924 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35353133 |
| 44 | NC_016123 | CATT | 3 | 106684 | 106694 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 35353133 |
| 45 | NC_016123 | TTTG | 3 | 110338 | 110349 | 12 | 0 % | 75 % | 25 % | 0 % | 0 % | 35353133 |
| 46 | NC_016123 | TGAA | 3 | 114705 | 114717 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 35353133 |
| 47 | NC_016123 | TTTG | 3 | 115461 | 115472 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 35353133 |
| 48 | NC_016123 | TTTC | 3 | 116117 | 116128 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35353133 |
| 49 | NC_016123 | AAGG | 3 | 116730 | 116740 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 35353133 |
| 50 | NC_016123 | AAGA | 3 | 119164 | 119176 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 35353133 |
| 51 | NC_016123 | AAGA | 3 | 119203 | 119215 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 35353133 |
| 52 | NC_016123 | AAGA | 3 | 119242 | 119254 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 35353133 |
| 53 | NC_016123 | CTTT | 3 | 119298 | 119308 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 35353133 |
| 54 | NC_016123 | GTTC | 5 | 120092 | 120112 | 21 | 0 % | 50 % | 25 % | 25 % | 9 % | 35353133 |
| 55 | NC_016123 | TTTG | 3 | 120817 | 120827 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 35353133 |
| 56 | NC_016123 | TTTC | 3 | 129296 | 129307 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35353133 |
| 57 | NC_016123 | AAAC | 3 | 130730 | 130741 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 35353133 |
| 58 | NC_016123 | GCGA | 3 | 131256 | 131267 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | 35353133 |
| 59 | NC_016123 | TTCC | 3 | 131782 | 131792 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 35353133 |
| 60 | NC_016123 | GGAA | 3 | 133138 | 133150 | 13 | 50 % | 0 % | 50 % | 0 % | 7 % | 35353133 |
| 61 | NC_016123 | GAAT | 3 | 137992 | 138003 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35353133 |
| 62 | NC_016123 | TGAC | 3 | 138301 | 138312 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 35353133 |
| 63 | NC_016123 | TTTC | 3 | 141858 | 141869 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35353133 |
| 64 | NC_016123 | AAAC | 3 | 145595 | 145606 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 35353133 |
| 65 | NC_016123 | AGTC | 3 | 150059 | 150070 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 35353133 |
| 66 | NC_016123 | TCAG | 3 | 151844 | 151854 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 35353133 |
| 67 | NC_016123 | GTCC | 3 | 151916 | 151926 | 11 | 0 % | 25 % | 25 % | 50 % | 9 % | 35353133 |
| 68 | NC_016123 | TCCC | 3 | 153473 | 153483 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 35353133 |
| 69 | NC_016123 | TTGC | 3 | 154408 | 154418 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 35353133 |
| 70 | NC_016123 | AGAT | 3 | 154708 | 154720 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 35353133 |
| 71 | NC_016123 | GTGG | 3 | 158586 | 158597 | 12 | 0 % | 25 % | 75 % | 0 % | 8 % | 35353133 |
| 72 | NC_016123 | ATGA | 3 | 159076 | 159087 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35353133 |
| 73 | NC_016123 | ATGA | 3 | 160313 | 160324 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35353133 |
| 74 | NC_016123 | TTAT | 3 | 170228 | 170238 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 35353133 |
| 75 | NC_016123 | TGGA | 3 | 172124 | 172134 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 35353133 |
| 76 | NC_016123 | AAAG | 3 | 174419 | 174429 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 35353133 |
| 77 | NC_016123 | AAAT | 3 | 174572 | 174583 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 35353133 |
| 78 | NC_016123 | TTGG | 3 | 176364 | 176374 | 11 | 0 % | 50 % | 50 % | 0 % | 9 % | 35353133 |
| 79 | NC_016123 | CCAA | 3 | 177619 | 177631 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | 35353133 |
| 80 | NC_016123 | CAAG | 3 | 181300 | 181310 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 35353133 |
| 81 | NC_016123 | TCCA | 3 | 185352 | 185362 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 35353133 |
| 82 | NC_016123 | TTTG | 3 | 186565 | 186576 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 35353133 |
| 83 | NC_016123 | GTGA | 3 | 188763 | 188773 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 35353133 |
| 84 | NC_016123 | CAGA | 3 | 189242 | 189253 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | 35353133 |
| 85 | NC_016123 | AGAA | 3 | 191127 | 191138 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 35353133 |
| 86 | NC_016123 | GTAA | 3 | 193244 | 193255 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35353133 |
| 87 | NC_016123 | TTCA | 3 | 195836 | 195848 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 35353133 |
| 88 | NC_016123 | GATC | 3 | 196945 | 196955 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 35353133 |
| 89 | NC_016123 | CCTT | 3 | 198915 | 198925 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 35353133 |
| 90 | NC_016123 | AATG | 4 | 199250 | 199265 | 16 | 50 % | 25 % | 25 % | 0 % | 6 % | 35353133 |
| 91 | NC_016123 | GCCG | 3 | 202904 | 202915 | 12 | 0 % | 0 % | 50 % | 50 % | 0 % | 35353133 |
| 92 | NC_016123 | GTAT | 3 | 204987 | 204997 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 35353133 |
| 93 | NC_016123 | ATTC | 3 | 213349 | 213360 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35353133 |
| 94 | NC_016123 | AAGC | 3 | 215649 | 215659 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 35353133 |
| 95 | NC_016123 | CACT | 3 | 218714 | 218725 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 35353133 |
| 96 | NC_016123 | AATG | 5 | 218921 | 218943 | 23 | 50 % | 25 % | 25 % | 0 % | 8 % | 35353133 |