Tetra-nucleotide Imperfect Repeats of Nicotiana undulata chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016068 | TAAA | 3 | 436 | 447 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 2 | NC_016068 | AAGA | 3 | 448 | 459 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 3 | NC_016068 | AAGT | 3 | 1245 | 1255 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 35165385 |
| 4 | NC_016068 | CATT | 3 | 4154 | 4165 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 5 | NC_016068 | TTTC | 3 | 5495 | 5505 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 35165385 |
| 6 | NC_016068 | AATA | 3 | 6005 | 6016 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 35165385 |
| 7 | NC_016068 | TAAT | 4 | 6440 | 6455 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 8 | NC_016068 | TAAA | 3 | 6742 | 6754 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 9 | NC_016068 | GTTT | 3 | 7547 | 7559 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 10 | NC_016068 | TTAC | 3 | 7776 | 7788 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 11 | NC_016068 | TTCT | 3 | 7989 | 7999 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 35165385 |
| 12 | NC_016068 | CAAG | 3 | 9092 | 9102 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | Non-Coding |
| 13 | NC_016068 | ATGA | 3 | 12757 | 12769 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 35165386 |
| 14 | NC_016068 | AAAT | 3 | 13572 | 13582 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 15 | NC_016068 | TATT | 3 | 16214 | 16226 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 16 | NC_016068 | CCCT | 3 | 16962 | 16973 | 12 | 0 % | 25 % | 0 % | 75 % | 8 % | Non-Coding |
| 17 | NC_016068 | AAAC | 3 | 19025 | 19035 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 35165386 |
| 18 | NC_016068 | ACCA | 3 | 19231 | 19242 | 12 | 50 % | 0 % | 0 % | 50 % | 8 % | 35165386 |
| 19 | NC_016068 | GAAT | 3 | 19613 | 19623 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 35165386 |
| 20 | NC_016068 | GTTT | 3 | 24143 | 24154 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 35165386 |
| 21 | NC_016068 | TTCA | 3 | 27567 | 27577 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 22 | NC_016068 | TGAT | 3 | 30486 | 30497 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 23 | NC_016068 | TTAA | 3 | 30764 | 30774 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 35165387 |
| 24 | NC_016068 | TTTA | 3 | 31119 | 31130 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 25 | NC_016068 | TTCT | 3 | 32848 | 32858 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 26 | NC_016068 | AAAG | 3 | 32998 | 33009 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 27 | NC_016068 | TGAA | 3 | 33433 | 33443 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 28 | NC_016068 | TTAT | 5 | 33999 | 34019 | 21 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 29 | NC_016068 | AAAT | 3 | 37400 | 37410 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 35165387 |
| 30 | NC_016068 | TATT | 3 | 38176 | 38187 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 31 | NC_016068 | AATG | 3 | 41889 | 41900 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35165387 |
| 32 | NC_016068 | TTTA | 3 | 43644 | 43655 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_016068 | AAGG | 3 | 48420 | 48430 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
| 34 | NC_016068 | TAAA | 3 | 57326 | 57336 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 35 | NC_016068 | TTAT | 3 | 59417 | 59428 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 36 | NC_016068 | AATA | 4 | 65944 | 65958 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 37 | NC_016068 | CAAA | 3 | 66260 | 66271 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 35165389 |
| 38 | NC_016068 | TTTC | 3 | 67305 | 67315 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 35165389 |
| 39 | NC_016068 | AAAT | 3 | 69283 | 69294 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 40 | NC_016068 | AAAT | 3 | 70376 | 70387 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 41 | NC_016068 | AAAC | 3 | 70471 | 70482 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 42 | NC_016068 | TGAA | 3 | 71376 | 71387 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 43 | NC_016068 | TTCC | 3 | 72093 | 72103 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 44 | NC_016068 | GGTT | 3 | 75911 | 75922 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 35165396 |
| 45 | NC_016068 | CTTT | 3 | 82495 | 82505 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 35165396 |
| 46 | NC_016068 | TTTC | 3 | 84771 | 84782 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35165396 |
| 47 | NC_016068 | CAAT | 3 | 85257 | 85267 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 35165396 |
| 48 | NC_016068 | AATA | 3 | 94191 | 94203 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 35165396 |
| 49 | NC_016068 | ATCC | 3 | 104787 | 104798 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 35165396 |
| 50 | NC_016068 | AAGG | 3 | 105089 | 105099 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 35165396 |
| 51 | NC_016068 | GAGG | 3 | 107713 | 107724 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 35165396 |
| 52 | NC_016068 | AGGT | 3 | 107925 | 107936 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 35165396 |
| 53 | NC_016068 | TAAG | 3 | 109045 | 109055 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 35165396 |
| 54 | NC_016068 | GGAA | 3 | 111119 | 111129 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 35165396 |
| 55 | NC_016068 | TAAA | 3 | 111979 | 111990 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 35165396 |
| 56 | NC_016068 | GTTT | 3 | 112819 | 112830 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 35165396 |
| 57 | NC_016068 | AAAT | 3 | 113557 | 113567 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 35165396 |
| 58 | NC_016068 | AATA | 3 | 114717 | 114727 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 35165396 |
| 59 | NC_016068 | GAAA | 3 | 117511 | 117522 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 35165396 |
| 60 | NC_016068 | ATGA | 3 | 119410 | 119421 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35165396 |
| 61 | NC_016068 | AAAG | 3 | 122624 | 122634 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 35165396 |
| 62 | NC_016068 | TTTA | 3 | 126765 | 126776 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 35165396 |
| 63 | NC_016068 | AAAG | 3 | 129216 | 129226 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 35165396 |
| 64 | NC_016068 | TTCT | 3 | 129664 | 129674 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 35165396 |
| 65 | NC_016068 | CTTT | 3 | 130116 | 130126 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 35165396 |
| 66 | NC_016068 | TTCC | 3 | 131368 | 131378 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 35165396 |
| 67 | NC_016068 | ATAA | 4 | 132372 | 132386 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | 35165396 |
| 68 | NC_016068 | CTTA | 3 | 133442 | 133452 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 35165396 |
| 69 | NC_016068 | CCTT | 3 | 137398 | 137408 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 35165396 |
| 70 | NC_016068 | GGAT | 3 | 137699 | 137710 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 35165396 |
| 71 | NC_016068 | TATT | 3 | 148294 | 148306 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 35165395 |
| 72 | NC_016068 | TGAT | 3 | 149296 | 149308 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 35165395 |
| 73 | NC_016068 | GATC | 3 | 149323 | 149333 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 35165395 |
| 74 | NC_016068 | ATTT | 3 | 152076 | 152087 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 35165395 |