Penta-nucleotide Imperfect Repeats of Pseudotsuga sinensis var. wilsoniana chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016064 | AGGGA | 4 | 6676 | 6696 | 21 | 40 % | 0 % | 60 % | 0 % | 9 % | Non-Coding |
2 | NC_016064 | AGATT | 3 | 6865 | 6878 | 14 | 40 % | 40 % | 20 % | 0 % | 7 % | Non-Coding |
3 | NC_016064 | TTCGA | 3 | 7077 | 7090 | 14 | 20 % | 40 % | 20 % | 20 % | 7 % | Non-Coding |
4 | NC_016064 | TTCTA | 3 | 15445 | 15459 | 15 | 20 % | 60 % | 0 % | 20 % | 6 % | 35165378 |
5 | NC_016064 | TTCGA | 3 | 27084 | 27098 | 15 | 20 % | 40 % | 20 % | 20 % | 6 % | 35165378 |
6 | NC_016064 | TGGCC | 3 | 30140 | 30154 | 15 | 0 % | 20 % | 40 % | 40 % | 0 % | 35165378 |
7 | NC_016064 | TCCTT | 3 | 47998 | 48012 | 15 | 0 % | 60 % | 0 % | 40 % | 6 % | 35165378 |
8 | NC_016064 | TTTCT | 3 | 51560 | 51574 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 35165378 |
9 | NC_016064 | GATCC | 3 | 53796 | 53809 | 14 | 20 % | 20 % | 20 % | 40 % | 7 % | 35165378 |
10 | NC_016064 | AATTC | 3 | 60186 | 60199 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | 35165378 |
11 | NC_016064 | CCTTT | 3 | 65057 | 65070 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 35165378 |
12 | NC_016064 | GGTAT | 3 | 81228 | 81241 | 14 | 20 % | 40 % | 40 % | 0 % | 7 % | 35165378 |
13 | NC_016064 | AAAAT | 3 | 113689 | 113704 | 16 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
14 | NC_016064 | TCCTG | 3 | 121256 | 121270 | 15 | 0 % | 40 % | 20 % | 40 % | 6 % | 35165385 |