Tetra-nucleotide Imperfect Repeats of Pseudotsuga sinensis var. wilsoniana chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016064 | GATG | 3 | 1640 | 1652 | 13 | 25 % | 25 % | 50 % | 0 % | 7 % | Non-Coding |
2 | NC_016064 | ATGA | 3 | 4403 | 4414 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
3 | NC_016064 | CCTT | 3 | 6265 | 6275 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 35165378 |
4 | NC_016064 | TTTC | 3 | 9784 | 9794 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
5 | NC_016064 | GGAA | 5 | 16184 | 16204 | 21 | 50 % | 0 % | 50 % | 0 % | 9 % | 35165378 |
6 | NC_016064 | TTAA | 3 | 19968 | 19979 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 35165378 |
7 | NC_016064 | GGAT | 3 | 34433 | 34443 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 35165378 |
8 | NC_016064 | CGTA | 3 | 41680 | 41690 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 35165378 |
9 | NC_016064 | AAAT | 3 | 48067 | 48079 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 35165378 |
10 | NC_016064 | TTTA | 3 | 48442 | 48453 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 35165378 |
11 | NC_016064 | ATTC | 3 | 54081 | 54092 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35165378 |
12 | NC_016064 | ATTG | 3 | 56150 | 56160 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 35165378 |
13 | NC_016064 | TCGT | 3 | 62551 | 62561 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 35165378 |
14 | NC_016064 | AATT | 3 | 66193 | 66203 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 35165378 |
15 | NC_016064 | TATT | 3 | 66937 | 66947 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 35165378 |
16 | NC_016064 | ATAG | 3 | 73970 | 73981 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 35165378 |
17 | NC_016064 | AAAT | 3 | 80685 | 80696 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 35165378 |
18 | NC_016064 | CCCT | 3 | 80727 | 80737 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 35165378 |
19 | NC_016064 | TTTC | 3 | 82526 | 82537 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35165378 |
20 | NC_016064 | ATCC | 3 | 87970 | 87981 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 35165378 |
21 | NC_016064 | GAGG | 3 | 91218 | 91229 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 35165378 |
22 | NC_016064 | AGGT | 3 | 91430 | 91441 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 35165378 |
23 | NC_016064 | AACC | 3 | 93060 | 93072 | 13 | 50 % | 0 % | 0 % | 50 % | 7 % | 35165378 |
24 | NC_016064 | TAGA | 3 | 100344 | 100355 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35165378 |
25 | NC_016064 | AAAT | 3 | 102774 | 102785 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 35165378 |
26 | NC_016064 | TGGA | 3 | 102889 | 102900 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 35165378 |
27 | NC_016064 | TTCT | 3 | 103546 | 103557 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35165378 |
28 | NC_016064 | ATCC | 3 | 106037 | 106048 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 35165378 |
29 | NC_016064 | TCCA | 3 | 106346 | 106357 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 35165378 |
30 | NC_016064 | CATT | 3 | 107310 | 107321 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35165378 |
31 | NC_016064 | TTCA | 3 | 109122 | 109133 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35165378 |
32 | NC_016064 | AAAG | 3 | 112217 | 112228 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 35165378 |
33 | NC_016064 | TCTA | 3 | 112950 | 112961 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
34 | NC_016064 | CGAT | 3 | 116233 | 116245 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 35165385 |