Tri-nucleotide Imperfect Repeats of Pseudotsuga sinensis var. wilsoniana chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_016064 | ATC | 4 | 2172 | 2182 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 35165378 |
2 | NC_016064 | AGA | 4 | 2384 | 2395 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 35165378 |
3 | NC_016064 | CTA | 4 | 6338 | 6348 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 35165378 |
4 | NC_016064 | GTT | 4 | 11435 | 11445 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | 35165378 |
5 | NC_016064 | GTA | 4 | 11734 | 11745 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 35165378 |
6 | NC_016064 | TAT | 4 | 15460 | 15471 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 35165378 |
7 | NC_016064 | AGA | 4 | 15474 | 15484 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 35165378 |
8 | NC_016064 | AGA | 4 | 15525 | 15535 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 35165378 |
9 | NC_016064 | TAA | 4 | 16515 | 16526 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 35165378 |
10 | NC_016064 | GGA | 4 | 25247 | 25258 | 12 | 33.33 % | 0 % | 66.67 % | 0 % | 8 % | 35165378 |
11 | NC_016064 | ATA | 4 | 28992 | 29002 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 35165378 |
12 | NC_016064 | TCT | 4 | 32468 | 32478 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 35165378 |
13 | NC_016064 | GAA | 4 | 35531 | 35542 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 0 % | 35165378 |
14 | NC_016064 | AAC | 4 | 38174 | 38185 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 35165378 |
15 | NC_016064 | ATG | 4 | 40587 | 40597 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 35165378 |
16 | NC_016064 | TAA | 5 | 45684 | 45697 | 14 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 35165378 |
17 | NC_016064 | AAT | 4 | 58224 | 58234 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 35165378 |
18 | NC_016064 | ATA | 4 | 63729 | 63740 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 35165378 |
19 | NC_016064 | CTT | 4 | 64961 | 64971 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 35165378 |
20 | NC_016064 | TTA | 4 | 66980 | 66990 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 35165378 |
21 | NC_016064 | TAT | 5 | 72531 | 72546 | 16 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | 35165378 |
22 | NC_016064 | GGA | 4 | 77030 | 77040 | 11 | 33.33 % | 0 % | 66.67 % | 0 % | 9 % | 35165378 |
23 | NC_016064 | AGA | 4 | 79961 | 79971 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 35165378 |
24 | NC_016064 | CTG | 4 | 81630 | 81641 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 35165378 |
25 | NC_016064 | GAA | 4 | 81676 | 81687 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 35165378 |
26 | NC_016064 | TCA | 4 | 93956 | 93966 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 35165378 |
27 | NC_016064 | TAT | 5 | 94409 | 94423 | 15 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | 35165378 |
28 | NC_016064 | AGA | 4 | 95742 | 95753 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 35165378 |
29 | NC_016064 | AGA | 4 | 98371 | 98381 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 35165378 |
30 | NC_016064 | ATG | 4 | 99396 | 99406 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 35165378 |
31 | NC_016064 | AAT | 4 | 100870 | 100880 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 35165378 |
32 | NC_016064 | GAA | 4 | 102064 | 102075 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 35165378 |
33 | NC_016064 | TTC | 4 | 102520 | 102532 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 35165378 |
34 | NC_016064 | CAT | 4 | 104444 | 104455 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 35165378 |
35 | NC_016064 | TAA | 4 | 109213 | 109223 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 35165378 |
36 | NC_016064 | ATC | 4 | 109371 | 109381 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 35165378 |
37 | NC_016064 | TAC | 4 | 109565 | 109575 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 35165378 |
38 | NC_016064 | GTA | 4 | 111730 | 111741 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 35165378 |
39 | NC_016064 | ATC | 4 | 121231 | 121241 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 35165385 |
40 | NC_016064 | TAC | 4 | 121518 | 121528 | 11 | 33.33 % | 33.33 % | 0 % | 33.33 % | 9 % | 35165385 |