Tetra-nucleotide Imperfect Repeats of Cephalotaxus wilsoniana chloroplast DNA
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_016063 | TAAA | 3 | 763 | 774 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 2 | NC_016063 | TAAG | 3 | 4129 | 4139 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 35295096 |
| 3 | NC_016063 | AGAC | 3 | 4646 | 4656 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 35295096 |
| 4 | NC_016063 | TTCT | 3 | 4809 | 4819 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 5 | NC_016063 | TTTC | 3 | 7603 | 7614 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35295096 |
| 6 | NC_016063 | ATAG | 5 | 7816 | 7836 | 21 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 7 | NC_016063 | GATC | 3 | 8221 | 8231 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 35295096 |
| 8 | NC_016063 | ATTT | 3 | 10385 | 10395 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_016063 | AAAG | 3 | 12036 | 12046 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 10 | NC_016063 | AATA | 3 | 12320 | 12331 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 11 | NC_016063 | TTTG | 3 | 12483 | 12494 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 35295097 |
| 12 | NC_016063 | TTGT | 3 | 13023 | 13034 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 13 | NC_016063 | AAAT | 3 | 15485 | 15495 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 14 | NC_016063 | AATA | 3 | 15870 | 15881 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 35295097 |
| 15 | NC_016063 | GCAT | 3 | 16804 | 16814 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 35295098 |
| 16 | NC_016063 | TAGA | 3 | 17623 | 17633 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 17 | NC_016063 | TTTA | 3 | 18314 | 18325 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 35295098 |
| 18 | NC_016063 | GTTG | 3 | 18782 | 18794 | 13 | 0 % | 50 % | 50 % | 0 % | 7 % | 35295098 |
| 19 | NC_016063 | ATAA | 3 | 19034 | 19046 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 35295098 |
| 20 | NC_016063 | TCTT | 3 | 20498 | 20509 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35295098 |
| 21 | NC_016063 | TTTC | 3 | 20528 | 20539 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35295098 |
| 22 | NC_016063 | ATTT | 3 | 22093 | 22104 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 35295098 |
| 23 | NC_016063 | ATTT | 3 | 28246 | 28257 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 35295098 |
| 24 | NC_016063 | TATT | 3 | 28291 | 28302 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 35295098 |
| 25 | NC_016063 | TTTA | 3 | 30067 | 30077 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 35295098 |
| 26 | NC_016063 | TCGA | 3 | 31082 | 31093 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 35295098 |
| 27 | NC_016063 | TCAA | 3 | 32106 | 32117 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 35295098 |
| 28 | NC_016063 | TTAA | 3 | 34792 | 34803 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 35295098 |
| 29 | NC_016063 | ATTT | 3 | 34859 | 34870 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 35295098 |
| 30 | NC_016063 | TCAA | 3 | 36048 | 36059 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 35295098 |
| 31 | NC_016063 | GATT | 3 | 37645 | 37656 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 35295098 |
| 32 | NC_016063 | TTGA | 4 | 42315 | 42329 | 15 | 25 % | 50 % | 25 % | 0 % | 6 % | 35295098 |
| 33 | NC_016063 | ATAA | 3 | 44229 | 44240 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 35295098 |
| 34 | NC_016063 | GTTT | 3 | 44753 | 44763 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 35295098 |
| 35 | NC_016063 | TATT | 3 | 45459 | 45470 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 35295098 |
| 36 | NC_016063 | AATT | 3 | 46728 | 46738 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 35295098 |
| 37 | NC_016063 | ATTT | 3 | 48635 | 48646 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 35295098 |
| 38 | NC_016063 | TAGT | 3 | 48978 | 48988 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 35295098 |
| 39 | NC_016063 | ATAG | 3 | 49597 | 49608 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35295098 |
| 40 | NC_016063 | TAAT | 3 | 49668 | 49678 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 35295098 |
| 41 | NC_016063 | TCAT | 3 | 49903 | 49914 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35295098 |
| 42 | NC_016063 | TCTT | 3 | 55095 | 55106 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35295098 |
| 43 | NC_016063 | ATTT | 3 | 60995 | 61006 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 35295098 |
| 44 | NC_016063 | AAAT | 3 | 62087 | 62097 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 35295098 |
| 45 | NC_016063 | TTCC | 3 | 62249 | 62260 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | 35295098 |
| 46 | NC_016063 | ATTT | 3 | 63679 | 63689 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 35295098 |
| 47 | NC_016063 | TTAA | 3 | 68475 | 68485 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 35295098 |
| 48 | NC_016063 | ATTT | 3 | 69010 | 69020 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 35295098 |
| 49 | NC_016063 | CATA | 3 | 71893 | 71904 | 12 | 50 % | 25 % | 0 % | 25 % | 0 % | 35295098 |
| 50 | NC_016063 | TAAA | 3 | 72585 | 72597 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 35295098 |
| 51 | NC_016063 | TGCA | 3 | 72990 | 73002 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 35295098 |
| 52 | NC_016063 | TCTA | 3 | 74398 | 74408 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 35295098 |
| 53 | NC_016063 | ATGG | 3 | 75259 | 75270 | 12 | 25 % | 25 % | 50 % | 0 % | 0 % | 35295098 |
| 54 | NC_016063 | ATCC | 3 | 75277 | 75289 | 13 | 25 % | 25 % | 0 % | 50 % | 7 % | 35295098 |
| 55 | NC_016063 | ATTC | 3 | 76305 | 76316 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35295098 |
| 56 | NC_016063 | AATA | 3 | 76401 | 76412 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 35295098 |
| 57 | NC_016063 | ATTA | 3 | 76500 | 76511 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 35295098 |
| 58 | NC_016063 | ATGT | 3 | 81782 | 81792 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 35295098 |
| 59 | NC_016063 | TAAA | 3 | 81861 | 81872 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 35295098 |
| 60 | NC_016063 | ATTA | 3 | 82486 | 82498 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 35295098 |
| 61 | NC_016063 | GATA | 3 | 83803 | 83814 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 35295098 |
| 62 | NC_016063 | TTAA | 3 | 86932 | 86944 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 35295098 |
| 63 | NC_016063 | TAAA | 3 | 87054 | 87065 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 35295098 |
| 64 | NC_016063 | ACAA | 4 | 88457 | 88472 | 16 | 75 % | 0 % | 0 % | 25 % | 6 % | 35295098 |
| 65 | NC_016063 | GAAA | 3 | 88949 | 88960 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 35295098 |
| 66 | NC_016063 | GAAA | 3 | 89045 | 89056 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 35295098 |
| 67 | NC_016063 | GAAA | 4 | 89101 | 89116 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 35295098 |
| 68 | NC_016063 | GAAA | 4 | 89133 | 89149 | 17 | 75 % | 0 % | 25 % | 0 % | 5 % | 35295098 |
| 69 | NC_016063 | GAAA | 5 | 89154 | 89173 | 20 | 75 % | 0 % | 25 % | 0 % | 5 % | 35295098 |
| 70 | NC_016063 | GAAA | 4 | 89190 | 89206 | 17 | 75 % | 0 % | 25 % | 0 % | 5 % | 35295098 |
| 71 | NC_016063 | GAAA | 5 | 89211 | 89230 | 20 | 75 % | 0 % | 25 % | 0 % | 5 % | 35295098 |
| 72 | NC_016063 | GAAA | 4 | 89283 | 89299 | 17 | 75 % | 0 % | 25 % | 0 % | 5 % | 35295098 |
| 73 | NC_016063 | GAAA | 3 | 89312 | 89323 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 35295098 |
| 74 | NC_016063 | GAAA | 3 | 89336 | 89347 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 35295098 |
| 75 | NC_016063 | GTAC | 3 | 90235 | 90246 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 35295098 |
| 76 | NC_016063 | TTTA | 4 | 90825 | 90840 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 35295098 |
| 77 | NC_016063 | TTCT | 3 | 91153 | 91163 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 35295098 |
| 78 | NC_016063 | GTCC | 3 | 91223 | 91234 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | 35295098 |
| 79 | NC_016063 | ATTC | 3 | 93379 | 93389 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 35295098 |
| 80 | NC_016063 | CTTT | 3 | 93897 | 93908 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 35295098 |
| 81 | NC_016063 | TATC | 3 | 96377 | 96388 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35295098 |
| 82 | NC_016063 | TATT | 3 | 97175 | 97186 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 35295098 |
| 83 | NC_016063 | AGAT | 3 | 98591 | 98603 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 35295098 |
| 84 | NC_016063 | TTAT | 3 | 100552 | 100563 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 35295098 |
| 85 | NC_016063 | ACTT | 3 | 101574 | 101585 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 35295098 |
| 86 | NC_016063 | TTTC | 3 | 102371 | 102382 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 35295098 |
| 87 | NC_016063 | TAGT | 3 | 102627 | 102637 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 35295098 |
| 88 | NC_016063 | AATG | 3 | 104925 | 104935 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 35295098 |
| 89 | NC_016063 | ACTT | 3 | 106867 | 106877 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 35295098 |
| 90 | NC_016063 | CTAC | 3 | 107989 | 108000 | 12 | 25 % | 25 % | 0 % | 50 % | 0 % | 35295098 |
| 91 | NC_016063 | AATT | 3 | 112625 | 112636 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 35295098 |
| 92 | NC_016063 | AAAC | 3 | 115680 | 115690 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 35295098 |
| 93 | NC_016063 | ATTT | 3 | 116078 | 116088 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 35295098 |
| 94 | NC_016063 | TTTA | 3 | 116806 | 116817 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 35295098 |
| 95 | NC_016063 | AATT | 3 | 117721 | 117732 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 96 | NC_016063 | ATTT | 3 | 119191 | 119201 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 35295102 |
| 97 | NC_016063 | TATT | 3 | 120580 | 120591 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 98 | NC_016063 | AATT | 3 | 130088 | 130098 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 35295103 |
| 99 | NC_016063 | ATTG | 3 | 132862 | 132872 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 35295103 |