Tetra-nucleotide Imperfect Repeats of Cucumis melo subsp. melo chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_015983 | AAGT | 3 | 977 | 987 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 34657817 |
| 2 | NC_015983 | AATT | 3 | 1847 | 1858 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_015983 | CATT | 3 | 3928 | 3939 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 4 | NC_015983 | TGAA | 3 | 4445 | 4455 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 5 | NC_015983 | GAAA | 3 | 4690 | 4700 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 6 | NC_015983 | ATTC | 3 | 5513 | 5523 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 34657817 |
| 7 | NC_015983 | TTCT | 3 | 7976 | 7986 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34657817 |
| 8 | NC_015983 | ATTT | 3 | 9221 | 9231 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_015983 | GTTA | 3 | 9321 | 9332 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 10 | NC_015983 | TACG | 3 | 11231 | 11242 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 34657817 |
| 11 | NC_015983 | TGAA | 3 | 19826 | 19836 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 34657818 |
| 12 | NC_015983 | GAAT | 3 | 23651 | 23661 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 34657818 |
| 13 | NC_015983 | TGAC | 3 | 27429 | 27439 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 34657818 |
| 14 | NC_015983 | ATTT | 3 | 27801 | 27813 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 34657818 |
| 15 | NC_015983 | CTTT | 3 | 30043 | 30054 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 16 | NC_015983 | TTTC | 3 | 32791 | 32802 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | Non-Coding |
| 17 | NC_015983 | ATTT | 3 | 32817 | 32828 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 18 | NC_015983 | TTTA | 4 | 32917 | 32933 | 17 | 25 % | 75 % | 0 % | 0 % | 5 % | Non-Coding |
| 19 | NC_015983 | ATGT | 3 | 33351 | 33362 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 20 | NC_015983 | ATTT | 3 | 33989 | 34000 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 21 | NC_015983 | GAAA | 3 | 36304 | 36315 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 34657818 |
| 22 | NC_015983 | AAGT | 3 | 37808 | 37818 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 23 | NC_015983 | TAAT | 3 | 38821 | 38832 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 24 | NC_015983 | AATA | 3 | 44683 | 44694 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_015983 | TTTA | 4 | 48645 | 48661 | 17 | 25 % | 75 % | 0 % | 0 % | 5 % | Non-Coding |
| 26 | NC_015983 | ATTT | 3 | 51629 | 51640 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_015983 | GTCT | 3 | 52196 | 52207 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 34657819 |
| 28 | NC_015983 | TTTA | 3 | 54518 | 54528 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 29 | NC_015983 | AATT | 3 | 59111 | 59121 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 30 | NC_015983 | TAAA | 3 | 62843 | 62853 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 31 | NC_015983 | TTCT | 3 | 65447 | 65458 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 32 | NC_015983 | CTTT | 3 | 67232 | 67243 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 33 | NC_015983 | TTTC | 3 | 69494 | 69505 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 34 | NC_015983 | TTAA | 3 | 70255 | 70267 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 35 | NC_015983 | TGAA | 3 | 70873 | 70884 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_015983 | TTTC | 3 | 70907 | 70919 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 37 | NC_015983 | TAAA | 3 | 71099 | 71110 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 38 | NC_015983 | TGAA | 3 | 74119 | 74129 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 34657821 |
| 39 | NC_015983 | ATCA | 3 | 82025 | 82036 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 34657821 |
| 40 | NC_015983 | ATTT | 3 | 84766 | 84776 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 34657821 |
| 41 | NC_015983 | TTAA | 3 | 86051 | 86061 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 34657821 |
| 42 | NC_015983 | TTCT | 3 | 89970 | 89980 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34657821 |
| 43 | NC_015983 | ATTT | 5 | 90252 | 90272 | 21 | 25 % | 75 % | 0 % | 0 % | 9 % | 34657821 |
| 44 | NC_015983 | TTGT | 3 | 91109 | 91120 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 34657821 |
| 45 | NC_015983 | CTTT | 3 | 91154 | 91164 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34657821 |
| 46 | NC_015983 | TGAT | 3 | 92973 | 92985 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 34657821 |
| 47 | NC_015983 | TGAT | 3 | 93015 | 93027 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 34657821 |
| 48 | NC_015983 | CCCT | 3 | 93359 | 93370 | 12 | 0 % | 25 % | 0 % | 75 % | 8 % | 34657821 |
| 49 | NC_015983 | GATT | 3 | 95147 | 95157 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 34657821 |
| 50 | NC_015983 | ATCC | 3 | 104513 | 104524 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 34657823 |
| 51 | NC_015983 | AAGG | 3 | 104914 | 104924 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 34657823 |
| 52 | NC_015983 | GAGG | 3 | 107638 | 107649 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 34657823 |
| 53 | NC_015983 | AGGT | 3 | 107850 | 107861 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 34657823 |
| 54 | NC_015983 | TAAG | 3 | 108970 | 108980 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 34657823 |
| 55 | NC_015983 | GGAA | 3 | 111082 | 111092 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 34657823 |
| 56 | NC_015983 | GAAA | 3 | 111978 | 111989 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 34657823 |
| 57 | NC_015983 | AGTA | 3 | 113013 | 113024 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 34657823 |
| 58 | NC_015983 | AAAT | 3 | 113697 | 113707 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 34657823 |
| 59 | NC_015983 | TTTA | 3 | 114641 | 114651 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 34657823 |
| 60 | NC_015983 | AAAT | 3 | 115370 | 115380 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 34657823 |
| 61 | NC_015983 | TAAA | 3 | 115803 | 115814 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34657823 |
| 62 | NC_015983 | AATT | 3 | 116180 | 116190 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 34657823 |
| 63 | NC_015983 | ATTT | 3 | 117369 | 117380 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 34657823 |
| 64 | NC_015983 | AAGA | 3 | 117386 | 117396 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 34657823 |
| 65 | NC_015983 | CCCA | 3 | 121871 | 121882 | 12 | 25 % | 0 % | 0 % | 75 % | 8 % | 34657823 |
| 66 | NC_015983 | AATA | 3 | 122622 | 122632 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 34657823 |
| 67 | NC_015983 | AATT | 4 | 125182 | 125197 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | 34657823 |
| 68 | NC_015983 | TATC | 3 | 125729 | 125739 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 34657823 |
| 69 | NC_015983 | TGTT | 3 | 125988 | 125999 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 34657823 |
| 70 | NC_015983 | ATTT | 3 | 126510 | 126521 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 34657823 |
| 71 | NC_015983 | CTTT | 3 | 126781 | 126791 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34657823 |
| 72 | NC_015983 | TTTG | 3 | 127495 | 127505 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 34657823 |
| 73 | NC_015983 | AATT | 3 | 127819 | 127829 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 34657823 |
| 74 | NC_015983 | TTCC | 3 | 131260 | 131270 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 34657823 |
| 75 | NC_015983 | CTTA | 3 | 133372 | 133382 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 34657823 |
| 76 | NC_015983 | CCTT | 3 | 137428 | 137438 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 34657823 |
| 77 | NC_015983 | GGAA | 3 | 137556 | 137567 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 34657823 |
| 78 | NC_015983 | GGAT | 3 | 137828 | 137839 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 34657823 |
| 79 | NC_015983 | AAAT | 3 | 141660 | 141671 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34657823 |
| 80 | NC_015983 | AATC | 3 | 147195 | 147205 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 34657825 |
| 81 | NC_015983 | ATCA | 3 | 149367 | 149379 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 34657825 |
| 82 | NC_015983 | AAAG | 3 | 151188 | 151198 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 34657825 |
| 83 | NC_015983 | ACAA | 3 | 151232 | 151243 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 34657825 |
| 84 | NC_015983 | AAAT | 5 | 152080 | 152100 | 21 | 75 % | 25 % | 0 % | 0 % | 9 % | 34657825 |
| 85 | NC_015983 | TATT | 3 | 152244 | 152255 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 34657825 |