Penta-nucleotide Imperfect Repeats of Spirodela polyrhiza chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_015891 | TTTCT | 3 | 3466 | 3479 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 34231610 |
2 | NC_015891 | TCTCT | 3 | 5332 | 5345 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 34231610 |
3 | NC_015891 | AATAA | 5 | 8004 | 8027 | 24 | 80 % | 20 % | 0 % | 0 % | 8 % | Non-Coding |
4 | NC_015891 | ACTTA | 3 | 9464 | 9477 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |
5 | NC_015891 | ATATT | 3 | 9522 | 9536 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
6 | NC_015891 | TTTAT | 3 | 17775 | 17788 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
7 | NC_015891 | TCTAA | 3 | 30566 | 30580 | 15 | 40 % | 40 % | 0 % | 20 % | 6 % | Non-Coding |
8 | NC_015891 | TTTTC | 3 | 33192 | 33206 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | Non-Coding |
9 | NC_015891 | ACAAA | 4 | 33927 | 33947 | 21 | 80 % | 0 % | 0 % | 20 % | 9 % | Non-Coding |
10 | NC_015891 | AAATT | 3 | 35583 | 35596 | 14 | 60 % | 40 % | 0 % | 0 % | 7 % | Non-Coding |
11 | NC_015891 | TTGAT | 3 | 35882 | 35896 | 15 | 20 % | 60 % | 20 % | 0 % | 6 % | Non-Coding |
12 | NC_015891 | ATCAT | 4 | 40768 | 40786 | 19 | 40 % | 40 % | 0 % | 20 % | 10 % | Non-Coding |
13 | NC_015891 | ATAAA | 3 | 41883 | 41896 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | Non-Coding |
14 | NC_015891 | CCAAT | 3 | 41979 | 41992 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | 34231612 |
15 | NC_015891 | TTATT | 3 | 47054 | 47068 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
16 | NC_015891 | TAATT | 3 | 47069 | 47082 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | Non-Coding |
17 | NC_015891 | TTCTA | 4 | 56199 | 56218 | 20 | 20 % | 60 % | 0 % | 20 % | 5 % | Non-Coding |
18 | NC_015891 | ATAAA | 3 | 65115 | 65130 | 16 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
19 | NC_015891 | AAAAT | 3 | 73763 | 73777 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
20 | NC_015891 | TTCTA | 3 | 83259 | 83272 | 14 | 20 % | 60 % | 0 % | 20 % | 7 % | Non-Coding |
21 | NC_015891 | ATTCT | 4 | 86202 | 86222 | 21 | 20 % | 60 % | 0 % | 20 % | 9 % | Non-Coding |
22 | NC_015891 | ATTTT | 3 | 106296 | 106310 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
23 | NC_015891 | TTCTT | 3 | 106862 | 106876 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | Non-Coding |
24 | NC_015891 | GCAAT | 3 | 107060 | 107074 | 15 | 40 % | 20 % | 20 % | 20 % | 0 % | Non-Coding |
25 | NC_015891 | ATCAA | 3 | 120093 | 120106 | 14 | 60 % | 20 % | 0 % | 20 % | 7 % | 34231616 |
26 | NC_015891 | TTATA | 3 | 123007 | 123021 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
27 | NC_015891 | AATTT | 3 | 131191 | 131205 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
28 | NC_015891 | AATAA | 3 | 137052 | 137066 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
29 | NC_015891 | ATTTT | 3 | 137402 | 137416 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
30 | NC_015891 | ATTTT | 3 | 144736 | 144750 | 15 | 20 % | 80 % | 0 % | 0 % | 0 % | Non-Coding |
31 | NC_015891 | CATTG | 3 | 152936 | 152950 | 15 | 20 % | 40 % | 20 % | 20 % | 0 % | Non-Coding |
32 | NC_015891 | AGAAA | 3 | 153131 | 153145 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
33 | NC_015891 | AATAA | 3 | 153693 | 153707 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |