Tetra-nucleotide Imperfect Repeats of Spirodela polyrhiza chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_015891 | TTTC | 3 | 374 | 384 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 2 | NC_015891 | ATAA | 3 | 498 | 509 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_015891 | AAGT | 3 | 1414 | 1424 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 34231610 |
| 4 | NC_015891 | CGAT | 3 | 2795 | 2805 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 34231610 |
| 5 | NC_015891 | TTAA | 3 | 5529 | 5541 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 34231610 |
| 6 | NC_015891 | AAAC | 3 | 6254 | 6266 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 34231610 |
| 7 | NC_015891 | TTAC | 4 | 8247 | 8261 | 15 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 8 | NC_015891 | ATAA | 3 | 9129 | 9140 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34231610 |
| 9 | NC_015891 | AATT | 4 | 9505 | 9520 | 16 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 10 | NC_015891 | ATTT | 3 | 9609 | 9619 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 11 | NC_015891 | TATT | 4 | 9710 | 9725 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 12 | NC_015891 | AATT | 3 | 10318 | 10330 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 13 | NC_015891 | GAAA | 3 | 11953 | 11963 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 14 | NC_015891 | TTTA | 3 | 14464 | 14474 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 34231610 |
| 15 | NC_015891 | AATC | 3 | 18822 | 18833 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 16 | NC_015891 | TCAA | 3 | 19056 | 19067 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 34231611 |
| 17 | NC_015891 | TCAA | 4 | 31215 | 31229 | 15 | 50 % | 25 % | 0 % | 25 % | 6 % | Non-Coding |
| 18 | NC_015891 | CTTT | 3 | 34400 | 34410 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 19 | NC_015891 | TTTA | 4 | 35114 | 35129 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 20 | NC_015891 | TTAA | 3 | 35315 | 35327 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 21 | NC_015891 | TAAT | 3 | 35363 | 35375 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 22 | NC_015891 | GAAA | 3 | 38937 | 38948 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 34231611 |
| 23 | NC_015891 | ATCT | 3 | 40257 | 40269 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 24 | NC_015891 | TTAT | 3 | 40787 | 40797 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 25 | NC_015891 | AATG | 3 | 44772 | 44783 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 34231612 |
| 26 | NC_015891 | CTTT | 4 | 48025 | 48039 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | 34231612 |
| 27 | NC_015891 | ATCA | 3 | 48403 | 48414 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 34231612 |
| 28 | NC_015891 | TAAT | 3 | 51826 | 51836 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 29 | NC_015891 | AAGA | 3 | 52082 | 52092 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 30 | NC_015891 | TTGA | 3 | 54049 | 54059 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 31 | NC_015891 | AAAT | 3 | 55957 | 55967 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 34231612 |
| 32 | NC_015891 | TTAT | 5 | 60773 | 60793 | 21 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 33 | NC_015891 | TGCA | 3 | 62099 | 62111 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 34231612 |
| 34 | NC_015891 | TTAT | 3 | 67082 | 67093 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 35 | NC_015891 | AATG | 3 | 67987 | 67998 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 34231613 |
| 36 | NC_015891 | AAAG | 3 | 68877 | 68888 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 34231613 |
| 37 | NC_015891 | TTTC | 3 | 70519 | 70530 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 38 | NC_015891 | TATT | 3 | 71867 | 71879 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 39 | NC_015891 | TATT | 3 | 72141 | 72152 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 40 | NC_015891 | AAGG | 3 | 73255 | 73265 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
| 41 | NC_015891 | ATTA | 3 | 73836 | 73847 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 42 | NC_015891 | TATT | 3 | 74757 | 74768 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 43 | NC_015891 | ATTT | 3 | 80470 | 80481 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 44 | NC_015891 | TAAA | 3 | 80710 | 80720 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 34231614 |
| 45 | NC_015891 | TTAG | 3 | 81244 | 81255 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 34231614 |
| 46 | NC_015891 | TTTC | 3 | 81339 | 81350 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 47 | NC_015891 | CATG | 3 | 83192 | 83204 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | Non-Coding |
| 48 | NC_015891 | AATT | 3 | 84240 | 84252 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 34231615 |
| 49 | NC_015891 | TAAA | 4 | 84252 | 84267 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 50 | NC_015891 | TTTG | 3 | 84684 | 84694 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 34231615 |
| 51 | NC_015891 | TTTA | 3 | 87106 | 87117 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 52 | NC_015891 | CAAT | 3 | 89586 | 89596 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 34231615 |
| 53 | NC_015891 | ATTA | 3 | 89919 | 89930 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 34231615 |
| 54 | NC_015891 | TTCT | 3 | 94819 | 94829 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34231616 |
| 55 | NC_015891 | CTTT | 3 | 95961 | 95971 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34231616 |
| 56 | NC_015891 | TGAT | 3 | 97804 | 97816 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 34231616 |
| 57 | NC_015891 | AATA | 3 | 98669 | 98681 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 34231616 |
| 58 | NC_015891 | TTTC | 3 | 98731 | 98742 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 34231616 |
| 59 | NC_015891 | ATAA | 4 | 101519 | 101535 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | Non-Coding |
| 60 | NC_015891 | ATCC | 3 | 110199 | 110210 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 61 | NC_015891 | GAGG | 3 | 113301 | 113312 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 62 | NC_015891 | AGGT | 3 | 113513 | 113524 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 63 | NC_015891 | TAAG | 3 | 114633 | 114643 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 64 | NC_015891 | GGAA | 3 | 116719 | 116729 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 34231616 |
| 65 | NC_015891 | AGAA | 3 | 117586 | 117598 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | 34231616 |
| 66 | NC_015891 | GGGT | 3 | 118852 | 118864 | 13 | 0 % | 25 % | 75 % | 0 % | 7 % | 34231616 |
| 67 | NC_015891 | GAAT | 3 | 120375 | 120386 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 34231616 |
| 68 | NC_015891 | AAAG | 3 | 121366 | 121376 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 34231616 |
| 69 | NC_015891 | GATA | 3 | 121787 | 121797 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 34231616 |
| 70 | NC_015891 | AGTG | 3 | 122275 | 122286 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 71 | NC_015891 | ATAA | 3 | 123037 | 123052 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 72 | NC_015891 | ATAA | 4 | 123059 | 123074 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 73 | NC_015891 | TTGT | 3 | 123089 | 123100 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 74 | NC_015891 | TGTT | 3 | 125298 | 125308 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 34231616 |
| 75 | NC_015891 | TTTA | 3 | 125426 | 125437 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 76 | NC_015891 | AATT | 3 | 125993 | 126003 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 77 | NC_015891 | TCTT | 3 | 126364 | 126375 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 78 | NC_015891 | AATT | 3 | 127992 | 128003 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 34231616 |
| 79 | NC_015891 | TATT | 3 | 130908 | 130920 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 80 | NC_015891 | TGAT | 3 | 131349 | 131360 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 34231617 |
| 81 | NC_015891 | TTTA | 3 | 132942 | 132952 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 82 | NC_015891 | AATA | 3 | 134620 | 134631 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34231617 |
| 83 | NC_015891 | TAAT | 3 | 139462 | 139473 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 34231617 |
| 84 | NC_015891 | CATT | 3 | 139624 | 139635 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 34231617 |
| 85 | NC_015891 | TTTC | 3 | 141087 | 141098 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 34231617 |
| 86 | NC_015891 | ATTT | 3 | 141575 | 141585 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 34231617 |
| 87 | NC_015891 | TTCT | 3 | 141671 | 141681 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34231617 |
| 88 | NC_015891 | TTCC | 3 | 143282 | 143292 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 34231617 |
| 89 | NC_015891 | AAAG | 3 | 144923 | 144933 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 90 | NC_015891 | CTTA | 3 | 145368 | 145378 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 91 | NC_015891 | GGAT | 3 | 149801 | 149812 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 92 | NC_015891 | ATTT | 3 | 152794 | 152805 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 93 | NC_015891 | AATA | 4 | 153723 | 153738 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 94 | NC_015891 | TTTA | 3 | 158422 | 158433 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 95 | NC_015891 | TGAA | 3 | 161268 | 161279 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 34231618 |
| 96 | NC_015891 | TTCT | 3 | 162098 | 162108 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34231618 |
| 97 | NC_015891 | ATCA | 3 | 162195 | 162207 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 34231618 |
| 98 | NC_015891 | AAAG | 3 | 164040 | 164050 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 34231618 |
| 99 | NC_015891 | ATTT | 3 | 165055 | 165066 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 34231618 |