Tri-nucleotide Imperfect Repeats of Phyllostachys nigra var. henonis chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_015826 | CAG | 4 | 680 | 691 | 12 | 33.33 % | 0 % | 33.33 % | 33.33 % | 8 % | 34003434 |
2 | NC_015826 | CTT | 4 | 4533 | 4544 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 34003434 |
3 | NC_015826 | TAA | 4 | 6389 | 6399 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
4 | NC_015826 | CTT | 4 | 6792 | 6802 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | Non-Coding |
5 | NC_015826 | AGT | 4 | 6906 | 6917 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | Non-Coding |
6 | NC_015826 | GAA | 4 | 9002 | 9013 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | Non-Coding |
7 | NC_015826 | TTG | 4 | 11317 | 11327 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | 34003435 |
8 | NC_015826 | TAA | 4 | 15996 | 16007 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
9 | NC_015826 | TAT | 4 | 16037 | 16047 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
10 | NC_015826 | TAA | 4 | 18113 | 18123 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
11 | NC_015826 | TAT | 4 | 18807 | 18817 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
12 | NC_015826 | ATA | 4 | 20858 | 20868 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
13 | NC_015826 | CTA | 4 | 21199 | 21210 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | Non-Coding |
14 | NC_015826 | ATT | 4 | 21307 | 21317 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
15 | NC_015826 | AGA | 4 | 22290 | 22301 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 34003435 |
16 | NC_015826 | AAC | 4 | 24936 | 24947 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 34003435 |
17 | NC_015826 | AAT | 5 | 26624 | 26638 | 15 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | 34003435 |
18 | NC_015826 | GAA | 4 | 30118 | 30129 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 34003435 |
19 | NC_015826 | ATT | 4 | 31892 | 31904 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
20 | NC_015826 | AGA | 4 | 32382 | 32392 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 34003435 |
21 | NC_015826 | GTT | 5 | 33575 | 33589 | 15 | 0 % | 66.67 % | 33.33 % | 0 % | 6 % | 34003436 |
22 | NC_015826 | TGC | 4 | 34548 | 34559 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 34003436 |
23 | NC_015826 | AAG | 4 | 44688 | 44699 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 34003436 |
24 | NC_015826 | AGT | 4 | 45097 | 45107 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 34003436 |
25 | NC_015826 | TAG | 4 | 45999 | 46009 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 34003436 |
26 | NC_015826 | TAT | 4 | 46739 | 46749 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
27 | NC_015826 | CTT | 4 | 50336 | 50347 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | Non-Coding |
28 | NC_015826 | TTC | 4 | 62922 | 62933 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 34003437 |
29 | NC_015826 | TCT | 4 | 63349 | 63359 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | Non-Coding |
30 | NC_015826 | ATA | 4 | 65285 | 65295 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
31 | NC_015826 | TTA | 4 | 65764 | 65775 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
32 | NC_015826 | TTC | 4 | 67673 | 67684 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | Non-Coding |
33 | NC_015826 | ATA | 4 | 68101 | 68111 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
34 | NC_015826 | AGA | 4 | 76906 | 76917 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 34003442 |
35 | NC_015826 | TAT | 4 | 77964 | 77974 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 34003442 |
36 | NC_015826 | TTC | 4 | 81497 | 81509 | 13 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 34003442 |
37 | NC_015826 | TCT | 4 | 83148 | 83161 | 14 | 0 % | 66.67 % | 0 % | 33.33 % | 7 % | 34003442 |
38 | NC_015826 | TTC | 4 | 84262 | 84272 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 34003442 |
39 | NC_015826 | ATA | 4 | 90919 | 90929 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 34003442 |
40 | NC_015826 | TAC | 4 | 92735 | 92746 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 34003442 |
41 | NC_015826 | AAG | 4 | 106595 | 106606 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 34003441 |
42 | NC_015826 | ATA | 4 | 108761 | 108771 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
43 | NC_015826 | CAA | 4 | 112027 | 112037 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | 34003441 |
44 | NC_015826 | TAT | 5 | 112895 | 112908 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
45 | NC_015826 | GTT | 4 | 116313 | 116323 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | 34003441 |
46 | NC_015826 | TAA | 4 | 118268 | 118278 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | Non-Coding |
47 | NC_015826 | GTA | 4 | 130328 | 130339 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | Non-Coding |