Tetra-nucleotide Imperfect Repeats of Phyllostachys edulis chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_015817 | AAGT | 3 | 786 | 796 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 34003400 |
2 | NC_015817 | TTTA | 3 | 4500 | 4511 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
3 | NC_015817 | TTCT | 3 | 5143 | 5153 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34003400 |
4 | NC_015817 | TTAT | 3 | 5868 | 5878 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
5 | NC_015817 | AAAT | 3 | 9313 | 9323 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
6 | NC_015817 | GAAA | 3 | 10919 | 10930 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 34003401 |
7 | NC_015817 | AAGT | 3 | 12334 | 12344 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
8 | NC_015817 | CTTT | 6 | 13250 | 13273 | 24 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
9 | NC_015817 | CCTT | 3 | 14726 | 14737 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | Non-Coding |
10 | NC_015817 | AAGA | 3 | 14882 | 14893 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
11 | NC_015817 | ATTT | 3 | 16468 | 16478 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
12 | NC_015817 | GTAT | 3 | 17400 | 17410 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
13 | NC_015817 | ATAC | 4 | 18277 | 18292 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | Non-Coding |
14 | NC_015817 | TTTC | 3 | 18874 | 18884 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
15 | NC_015817 | AAAT | 3 | 18914 | 18925 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
16 | NC_015817 | AAAG | 3 | 19380 | 19390 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
17 | NC_015817 | ATCA | 3 | 19567 | 19577 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
18 | NC_015817 | ATGA | 3 | 19925 | 19936 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
19 | NC_015817 | TTTC | 3 | 22283 | 22295 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 34003401 |
20 | NC_015817 | AGAA | 3 | 26871 | 26882 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 34003401 |
21 | NC_015817 | TTCA | 3 | 29612 | 29622 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 34003401 |
22 | NC_015817 | ATTT | 3 | 31750 | 31761 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
23 | NC_015817 | TTAA | 3 | 31841 | 31852 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
24 | NC_015817 | CTTT | 3 | 34834 | 34844 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
25 | NC_015817 | AAAT | 3 | 36640 | 36651 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34003402 |
26 | NC_015817 | TTTC | 3 | 38470 | 38480 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
27 | NC_015817 | AAGA | 3 | 41771 | 41782 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 34003402 |
28 | NC_015817 | CTAG | 3 | 42714 | 42726 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 34003402 |
29 | NC_015817 | ATCA | 3 | 44758 | 44768 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 34003402 |
30 | NC_015817 | TCCT | 3 | 45173 | 45184 | 12 | 0 % | 50 % | 0 % | 50 % | 0 % | 34003402 |
31 | NC_015817 | AAAG | 3 | 47239 | 47249 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
32 | NC_015817 | TTGA | 3 | 49219 | 49231 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
33 | NC_015817 | TATT | 3 | 50492 | 50503 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
34 | NC_015817 | CAGA | 3 | 50986 | 50996 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 34003403 |
35 | NC_015817 | TAGG | 4 | 54161 | 54176 | 16 | 25 % | 25 % | 50 % | 0 % | 6 % | Non-Coding |
36 | NC_015817 | AATT | 3 | 56298 | 56309 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
37 | NC_015817 | AATA | 4 | 58628 | 58644 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | Non-Coding |
38 | NC_015817 | TCTT | 3 | 61754 | 61765 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 34003403 |
39 | NC_015817 | ATTC | 3 | 61928 | 61938 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
40 | NC_015817 | TGTT | 3 | 63106 | 63116 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
41 | NC_015817 | TAAA | 3 | 65961 | 65972 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
42 | NC_015817 | AAAG | 3 | 66685 | 66695 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
43 | NC_015817 | CGTT | 3 | 67034 | 67045 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | Non-Coding |
44 | NC_015817 | TATT | 3 | 67608 | 67618 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
45 | NC_015817 | AAAT | 3 | 67936 | 67947 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 34003404 |
46 | NC_015817 | AGAA | 3 | 70957 | 70968 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 34003409 |
47 | NC_015817 | TTTA | 3 | 74287 | 74298 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 34003409 |
48 | NC_015817 | GAAA | 4 | 74400 | 74415 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 34003409 |
49 | NC_015817 | TCTT | 5 | 76143 | 76161 | 19 | 0 % | 75 % | 0 % | 25 % | 10 % | 34003409 |
50 | NC_015817 | TTTC | 3 | 76868 | 76878 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34003409 |
51 | NC_015817 | AGAA | 3 | 78826 | 78836 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 34003409 |
52 | NC_015817 | AATG | 3 | 83626 | 83636 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 34003409 |
53 | NC_015817 | TTCT | 3 | 91956 | 91966 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 34003409 |
54 | NC_015817 | AAAC | 3 | 96844 | 96856 | 13 | 75 % | 0 % | 0 % | 25 % | 7 % | 34003407 |
55 | NC_015817 | ATCC | 3 | 96978 | 96989 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 34003407 |
56 | NC_015817 | CTAT | 3 | 97366 | 97377 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
57 | NC_015817 | ACGG | 3 | 100236 | 100247 | 12 | 25 % | 0 % | 50 % | 25 % | 8 % | Non-Coding |
58 | NC_015817 | AGGT | 3 | 100520 | 100531 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
59 | NC_015817 | AACG | 3 | 101845 | 101856 | 12 | 50 % | 0 % | 25 % | 25 % | 0 % | Non-Coding |
60 | NC_015817 | AAAG | 4 | 103182 | 103197 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
61 | NC_015817 | GAAT | 3 | 104799 | 104809 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
62 | NC_015817 | AAGG | 3 | 104811 | 104822 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | Non-Coding |
63 | NC_015817 | AAAG | 3 | 105143 | 105153 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 34003407 |
64 | NC_015817 | GTTA | 3 | 105304 | 105316 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 34003407 |
65 | NC_015817 | CAAA | 3 | 108443 | 108454 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | 34003407 |
66 | NC_015817 | ATAA | 4 | 112481 | 112497 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | Non-Coding |
67 | NC_015817 | TTTA | 3 | 113305 | 113316 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
68 | NC_015817 | AAAT | 3 | 115693 | 115704 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 34003407 |
69 | NC_015817 | ATTC | 3 | 118084 | 118094 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
70 | NC_015817 | AAAT | 3 | 118498 | 118508 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
71 | NC_015817 | CTTT | 4 | 119696 | 119711 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
72 | NC_015817 | TCGT | 3 | 121036 | 121047 | 12 | 0 % | 50 % | 25 % | 25 % | 0 % | Non-Coding |
73 | NC_015817 | CTTA | 3 | 121243 | 121253 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
74 | NC_015817 | CCGT | 3 | 122646 | 122657 | 12 | 0 % | 25 % | 25 % | 50 % | 8 % | Non-Coding |
75 | NC_015817 | AGGA | 3 | 125680 | 125691 | 12 | 50 % | 0 % | 50 % | 0 % | 8 % | 34003408 |
76 | NC_015817 | GGAT | 3 | 125904 | 125915 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 34003408 |
77 | NC_015817 | AGAA | 3 | 130927 | 130937 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 34003408 |
78 | NC_015817 | TGAA | 3 | 136449 | 136460 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
79 | NC_015817 | CATT | 3 | 139257 | 139267 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |