Tetra-nucleotide Imperfect Repeats of Ageratina adenophora chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_015621 | AAGT | 3 | 1189 | 1199 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33470178 |
| 2 | NC_015621 | AAAG | 3 | 1700 | 1711 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 3 | NC_015621 | TAAA | 3 | 1812 | 1823 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_015621 | AGAA | 3 | 1967 | 1979 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 5 | NC_015621 | AAAT | 3 | 4521 | 4531 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_015621 | GATA | 3 | 5068 | 5079 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 7 | NC_015621 | TCTT | 3 | 6419 | 6429 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 8 | NC_015621 | GAAA | 3 | 6598 | 6608 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 9 | NC_015621 | TTCT | 3 | 7854 | 7864 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33470178 |
| 10 | NC_015621 | TTCT | 3 | 11110 | 11122 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 11 | NC_015621 | AAAG | 3 | 17585 | 17596 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33470179 |
| 12 | NC_015621 | GAAT | 3 | 17792 | 17802 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33470179 |
| 13 | NC_015621 | AACA | 3 | 23704 | 23714 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 33470179 |
| 14 | NC_015621 | ACTT | 3 | 24376 | 24386 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 33470179 |
| 15 | NC_015621 | ATAA | 4 | 30020 | 30036 | 17 | 75 % | 25 % | 0 % | 0 % | 5 % | Non-Coding |
| 16 | NC_015621 | TAAA | 3 | 30853 | 30865 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 17 | NC_015621 | TTTG | 4 | 31169 | 31184 | 16 | 0 % | 75 % | 25 % | 0 % | 6 % | Non-Coding |
| 18 | NC_015621 | AATT | 3 | 32158 | 32169 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 19 | NC_015621 | AAAG | 3 | 32198 | 32209 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | Non-Coding |
| 20 | NC_015621 | GAAA | 3 | 33808 | 33819 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33470179 |
| 21 | NC_015621 | TGTA | 3 | 35329 | 35339 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 22 | NC_015621 | GATC | 3 | 36360 | 36370 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 23 | NC_015621 | AATG | 3 | 39704 | 39715 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 33470180 |
| 24 | NC_015621 | CTTT | 3 | 42922 | 42932 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33470180 |
| 25 | NC_015621 | GTAA | 3 | 43860 | 43870 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33470180 |
| 26 | NC_015621 | TATT | 3 | 45929 | 45940 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_015621 | TTGA | 3 | 46631 | 46643 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 28 | NC_015621 | TAAT | 3 | 48697 | 48708 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 33470180 |
| 29 | NC_015621 | TTTA | 3 | 50239 | 50249 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 30 | NC_015621 | ATCA | 3 | 54627 | 54637 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 31 | NC_015621 | TGAT | 3 | 58481 | 58491 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 32 | NC_015621 | ATTG | 3 | 61413 | 61423 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 33470181 |
| 33 | NC_015621 | ATAA | 3 | 62865 | 62875 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 34 | NC_015621 | TTTG | 3 | 63927 | 63938 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 33470181 |
| 35 | NC_015621 | AAGA | 3 | 66248 | 66259 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_015621 | ATCT | 3 | 67113 | 67124 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 37 | NC_015621 | TATT | 3 | 67582 | 67593 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 38 | NC_015621 | TGAA | 3 | 68584 | 68595 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 39 | NC_015621 | TTTC | 3 | 68618 | 68630 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 40 | NC_015621 | TTTC | 3 | 69835 | 69846 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 33470178 |
| 41 | NC_015621 | AAGA | 3 | 69887 | 69898 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33470178 |
| 42 | NC_015621 | TTTA | 3 | 70074 | 70085 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33470178 |
| 43 | NC_015621 | AAGA | 3 | 71743 | 71754 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33470178 |
| 44 | NC_015621 | CTTT | 3 | 72031 | 72041 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33470178 |
| 45 | NC_015621 | GGTT | 3 | 73069 | 73080 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 33470178 |
| 46 | NC_015621 | TAAA | 3 | 74057 | 74067 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 33470178 |
| 47 | NC_015621 | TTTC | 3 | 74937 | 74947 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33470178 |
| 48 | NC_015621 | AAGT | 3 | 75359 | 75369 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33470178 |
| 49 | NC_015621 | AGAA | 3 | 76853 | 76863 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 33470178 |
| 50 | NC_015621 | AATC | 4 | 78283 | 78298 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | 33470178 |
| 51 | NC_015621 | TTCT | 3 | 82639 | 82650 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | 33470178 |
| 52 | NC_015621 | TTAT | 3 | 82826 | 82837 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33470178 |
| 53 | NC_015621 | CAAT | 3 | 83144 | 83154 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 33470178 |
| 54 | NC_015621 | TGAT | 3 | 91452 | 91464 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 33470178 |
| 55 | NC_015621 | AATA | 3 | 92296 | 92308 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 33470178 |
| 56 | NC_015621 | CCCT | 3 | 98573 | 98583 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 33470178 |
| 57 | NC_015621 | GGAT | 3 | 102478 | 102489 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 33470182 |
| 58 | NC_015621 | GAGG | 3 | 105390 | 105401 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 33470182 |
| 59 | NC_015621 | AGGT | 3 | 105602 | 105613 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 33470182 |
| 60 | NC_015621 | TAAG | 3 | 106722 | 106732 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33470182 |
| 61 | NC_015621 | ATTT | 3 | 109627 | 109638 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33470182 |
| 62 | NC_015621 | TCTT | 3 | 111409 | 111420 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 33470182 |
| 63 | NC_015621 | GAAA | 3 | 111848 | 111859 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33470182 |
| 64 | NC_015621 | GAAA | 5 | 111928 | 111947 | 20 | 75 % | 0 % | 25 % | 0 % | 10 % | 33470182 |
| 65 | NC_015621 | ATAA | 3 | 113297 | 113307 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 33470182 |
| 66 | NC_015621 | AAGT | 3 | 113627 | 113637 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33470182 |
| 67 | NC_015621 | ATTT | 3 | 114991 | 115002 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33470182 |
| 68 | NC_015621 | AAAT | 3 | 115556 | 115566 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 33470182 |
| 69 | NC_015621 | CTTT | 3 | 115686 | 115696 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33470182 |
| 70 | NC_015621 | GATT | 3 | 115890 | 115901 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 33470182 |
| 71 | NC_015621 | TATT | 3 | 121097 | 121108 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 33470182 |
| 72 | NC_015621 | TCTT | 4 | 123330 | 123345 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 33470182 |
| 73 | NC_015621 | AAAT | 3 | 126443 | 126453 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 33470182 |
| 74 | NC_015621 | TTTA | 3 | 126690 | 126701 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33470182 |
| 75 | NC_015621 | CTTA | 3 | 128768 | 128778 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 33470182 |
| 76 | NC_015621 | TCTA | 3 | 132685 | 132696 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 33470182 |
| 77 | NC_015621 | ATCC | 3 | 133011 | 133022 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 33470182 |
| 78 | NC_015621 | TATT | 3 | 143192 | 143204 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 33470186 |
| 79 | NC_015621 | TGAT | 3 | 144173 | 144185 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 33470186 |
| 80 | NC_015621 | ATTT | 3 | 146899 | 146910 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33470186 |