Tetra-nucleotide Imperfect Repeats of Nelumbo nucifera chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_015610 | TAAT | 4 | 1817 | 1831 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 2 | NC_015610 | TAAT | 3 | 1903 | 1913 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 3 | NC_015610 | AAAT | 3 | 3710 | 3721 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 33436203 |
| 4 | NC_015610 | ATAA | 5 | 4970 | 4989 | 20 | 75 % | 25 % | 0 % | 0 % | 5 % | Non-Coding |
| 5 | NC_015610 | TTTC | 3 | 8958 | 8969 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 6 | NC_015610 | GAAA | 3 | 10453 | 10463 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 7 | NC_015610 | TTTA | 3 | 15121 | 15132 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 8 | NC_015610 | AAAT | 3 | 15452 | 15462 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 9 | NC_015610 | TCGC | 3 | 19208 | 19220 | 13 | 0 % | 25 % | 25 % | 50 % | 7 % | 33436203 |
| 10 | NC_015610 | CGAT | 3 | 20268 | 20280 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 33436203 |
| 11 | NC_015610 | TTCA | 3 | 24931 | 24942 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 33436204 |
| 12 | NC_015610 | GAAT | 3 | 25029 | 25039 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33436204 |
| 13 | NC_015610 | TCAT | 3 | 29193 | 29203 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 14 | NC_015610 | AGCT | 3 | 29749 | 29760 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | Non-Coding |
| 15 | NC_015610 | AACA | 3 | 34152 | 34163 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 16 | NC_015610 | ATTC | 3 | 34631 | 34641 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 17 | NC_015610 | TAAG | 3 | 35191 | 35202 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 18 | NC_015610 | TTCA | 3 | 35675 | 35685 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 19 | NC_015610 | AGAA | 3 | 36094 | 36104 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 20 | NC_015610 | CTTT | 3 | 36347 | 36357 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 21 | NC_015610 | GAAA | 3 | 38428 | 38439 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33436204 |
| 22 | NC_015610 | GCTT | 3 | 38831 | 38841 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 33436204 |
| 23 | NC_015610 | AATT | 3 | 42722 | 42732 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 33436204 |
| 24 | NC_015610 | AATG | 3 | 44369 | 44380 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 33436204 |
| 25 | NC_015610 | AAGG | 3 | 48182 | 48193 | 12 | 50 % | 0 % | 50 % | 0 % | 0 % | 33436205 |
| 26 | NC_015610 | TGTA | 3 | 50746 | 50757 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 27 | NC_015610 | AATT | 3 | 51372 | 51384 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | Non-Coding |
| 28 | NC_015610 | TTGA | 3 | 52104 | 52116 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 29 | NC_015610 | CAAA | 3 | 52208 | 52218 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 30 | NC_015610 | TAAA | 3 | 53336 | 53347 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 31 | NC_015610 | CTTT | 3 | 53542 | 53554 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 32 | NC_015610 | GTTT | 3 | 55715 | 55727 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 33 | NC_015610 | ATTT | 3 | 58795 | 58806 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_015610 | TGCA | 3 | 62457 | 62469 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 33436205 |
| 35 | NC_015610 | GTTA | 3 | 63559 | 63569 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 36 | NC_015610 | AAAT | 3 | 65448 | 65459 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_015610 | TTAT | 3 | 66219 | 66230 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 38 | NC_015610 | TGAA | 3 | 66936 | 66946 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 39 | NC_015610 | ATTT | 3 | 67590 | 67601 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 40 | NC_015610 | GAAT | 3 | 70004 | 70015 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 41 | NC_015610 | AGAA | 3 | 72277 | 72288 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 42 | NC_015610 | TCGT | 3 | 72474 | 72484 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | Non-Coding |
| 43 | NC_015610 | TTTC | 3 | 74307 | 74317 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 44 | NC_015610 | TTGA | 3 | 74615 | 74625 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 45 | NC_015610 | ATAA | 3 | 75135 | 75145 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 46 | NC_015610 | ATTT | 3 | 76616 | 76626 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 47 | NC_015610 | TTTA | 3 | 77994 | 78005 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33436207 |
| 48 | NC_015610 | ATAA | 3 | 78874 | 78885 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 33436207 |
| 49 | NC_015610 | CTTT | 3 | 79100 | 79111 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 33436207 |
| 50 | NC_015610 | AAAG | 3 | 84438 | 84448 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 33436207 |
| 51 | NC_015610 | ATCT | 3 | 85574 | 85584 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 33436207 |
| 52 | NC_015610 | GTTA | 3 | 90109 | 90119 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 33436207 |
| 53 | NC_015610 | AAAG | 3 | 90315 | 90326 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33436207 |
| 54 | NC_015610 | CAAT | 3 | 90453 | 90463 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 33436207 |
| 55 | NC_015610 | TTCT | 3 | 95521 | 95531 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33436207 |
| 56 | NC_015610 | CTTT | 3 | 96708 | 96718 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33436207 |
| 57 | NC_015610 | TGAT | 3 | 98539 | 98551 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 33436207 |
| 58 | NC_015610 | AATA | 3 | 99476 | 99488 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 33436207 |
| 59 | NC_015610 | TTCT | 3 | 100580 | 100590 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33436207 |
| 60 | NC_015610 | ATCC | 3 | 110714 | 110725 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 33436207 |
| 61 | NC_015610 | AAGG | 3 | 111059 | 111069 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 33436207 |
| 62 | NC_015610 | GAGG | 3 | 113778 | 113789 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 33436207 |
| 63 | NC_015610 | AGGT | 3 | 113990 | 114001 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 33436207 |
| 64 | NC_015610 | TAAG | 3 | 115110 | 115120 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33436207 |
| 65 | NC_015610 | ATTT | 3 | 116189 | 116199 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 33436207 |
| 66 | NC_015610 | GGAA | 3 | 117207 | 117217 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 33436207 |
| 67 | NC_015610 | ATTT | 3 | 118671 | 118681 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 33436207 |
| 68 | NC_015610 | AATT | 3 | 118721 | 118732 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 33436207 |
| 69 | NC_015610 | TAAA | 3 | 121164 | 121174 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 33436207 |
| 70 | NC_015610 | TTAT | 4 | 121259 | 121275 | 17 | 25 % | 75 % | 0 % | 0 % | 5 % | 33436207 |
| 71 | NC_015610 | AAAC | 3 | 121505 | 121515 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 33436207 |
| 72 | NC_015610 | CTTT | 4 | 122111 | 122125 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | 33436207 |
| 73 | NC_015610 | AGAA | 3 | 127069 | 127080 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33436207 |
| 74 | NC_015610 | ATTC | 3 | 134440 | 134451 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 33436207 |
| 75 | NC_015610 | GTAT | 3 | 134859 | 134870 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 33436207 |
| 76 | NC_015610 | TTTC | 3 | 135517 | 135528 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 33436207 |
| 77 | NC_015610 | TTTA | 3 | 135530 | 135540 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 33436207 |
| 78 | NC_015610 | TTCC | 3 | 137938 | 137948 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 33436207 |
| 79 | NC_015610 | ATAA | 4 | 138954 | 138968 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | 33436207 |
| 80 | NC_015610 | CTTA | 3 | 140035 | 140045 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 33436207 |
| 81 | NC_015610 | CCTT | 3 | 144086 | 144096 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 33436207 |
| 82 | NC_015610 | GGAT | 3 | 144430 | 144441 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 33436207 |
| 83 | NC_015610 | AGAA | 3 | 154565 | 154575 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 33436211 |
| 84 | NC_015610 | ATCA | 3 | 156604 | 156616 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 33436211 |
| 85 | NC_015610 | TGAT | 3 | 156699 | 156711 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 33436211 |
| 86 | NC_015610 | AAAG | 3 | 158437 | 158447 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 33436211 |
| 87 | NC_015610 | ATTT | 3 | 159497 | 159508 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33436211 |