Tetra-nucleotide Imperfect Repeats of Nelumbo lutea chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_015605 | TAAT | 4 | 1646 | 1660 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 2 | NC_015605 | ATTA | 4 | 1696 | 1710 | 15 | 50 % | 50 % | 0 % | 0 % | 6 % | Non-Coding |
| 3 | NC_015605 | AAAT | 3 | 3547 | 3558 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 33436193 |
| 4 | NC_015605 | ATAA | 4 | 4804 | 4819 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 5 | NC_015605 | TTTC | 3 | 8786 | 8797 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 6 | NC_015605 | TTGG | 3 | 10283 | 10293 | 11 | 0 % | 50 % | 50 % | 0 % | 9 % | Non-Coding |
| 7 | NC_015605 | AAAT | 3 | 15307 | 15317 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 8 | NC_015605 | TCGC | 3 | 19037 | 19049 | 13 | 0 % | 25 % | 25 % | 50 % | 7 % | 33436193 |
| 9 | NC_015605 | CGAT | 3 | 20097 | 20109 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 33436193 |
| 10 | NC_015605 | TTCA | 3 | 24758 | 24769 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 33436194 |
| 11 | NC_015605 | GAAT | 3 | 24861 | 24871 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33436194 |
| 12 | NC_015605 | TCAT | 3 | 29025 | 29035 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 13 | NC_015605 | AACA | 3 | 34025 | 34036 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 14 | NC_015605 | ATTC | 3 | 34498 | 34508 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 15 | NC_015605 | TAAG | 3 | 35202 | 35213 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 16 | NC_015605 | TTCA | 3 | 35714 | 35724 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 17 | NC_015605 | CTTT | 3 | 36384 | 36394 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 18 | NC_015605 | GAAA | 3 | 38460 | 38471 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33436194 |
| 19 | NC_015605 | GCTT | 3 | 38863 | 38873 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 33436194 |
| 20 | NC_015605 | AATT | 3 | 42756 | 42766 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 33436194 |
| 21 | NC_015605 | AATG | 3 | 44403 | 44414 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 33436194 |
| 22 | NC_015605 | AAGG | 3 | 48215 | 48226 | 12 | 50 % | 0 % | 50 % | 0 % | 0 % | 33436195 |
| 23 | NC_015605 | TGTA | 3 | 50785 | 50796 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 24 | NC_015605 | TTAT | 3 | 51634 | 51645 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_015605 | TTGA | 3 | 52197 | 52209 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 26 | NC_015605 | CAAA | 3 | 52301 | 52311 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
| 27 | NC_015605 | CTTT | 3 | 53644 | 53656 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 28 | NC_015605 | GTTT | 3 | 55837 | 55849 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 29 | NC_015605 | ATTT | 3 | 58742 | 58753 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 30 | NC_015605 | TGCA | 3 | 62398 | 62410 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 33436195 |
| 31 | NC_015605 | GTTA | 3 | 63493 | 63503 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 32 | NC_015605 | AAAT | 3 | 65382 | 65393 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_015605 | TTAT | 3 | 66153 | 66164 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 34 | NC_015605 | TGAA | 3 | 66870 | 66880 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 35 | NC_015605 | ATTT | 3 | 67527 | 67538 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 36 | NC_015605 | GAAT | 3 | 69951 | 69962 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 37 | NC_015605 | AGAA | 3 | 72234 | 72245 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 38 | NC_015605 | TCGT | 3 | 72432 | 72442 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | Non-Coding |
| 39 | NC_015605 | TTTC | 3 | 74274 | 74284 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 40 | NC_015605 | TTGA | 3 | 74592 | 74602 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 41 | NC_015605 | ATAA | 3 | 75072 | 75082 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 42 | NC_015605 | ATTT | 3 | 76537 | 76547 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 43 | NC_015605 | TTTA | 3 | 77915 | 77926 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33436197 |
| 44 | NC_015605 | ATAA | 3 | 78794 | 78805 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 33436197 |
| 45 | NC_015605 | CTTT | 3 | 79020 | 79031 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 33436197 |
| 46 | NC_015605 | AAAG | 3 | 84360 | 84370 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 33436197 |
| 47 | NC_015605 | ATCT | 3 | 85496 | 85506 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 33436197 |
| 48 | NC_015605 | GTTA | 3 | 90040 | 90050 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 33436197 |
| 49 | NC_015605 | AAAG | 3 | 90228 | 90239 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33436197 |
| 50 | NC_015605 | CAAT | 3 | 90366 | 90376 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 33436197 |
| 51 | NC_015605 | TTCT | 3 | 95434 | 95444 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33436197 |
| 52 | NC_015605 | CTTT | 3 | 96621 | 96631 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33436197 |
| 53 | NC_015605 | TGAT | 3 | 98452 | 98464 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 33436197 |
| 54 | NC_015605 | AATA | 3 | 99371 | 99383 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 33436197 |
| 55 | NC_015605 | TTCT | 3 | 100475 | 100485 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33436197 |
| 56 | NC_015605 | TTAT | 4 | 106789 | 106804 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 33436197 |
| 57 | NC_015605 | ATCC | 3 | 110615 | 110626 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 33436197 |
| 58 | NC_015605 | AAGG | 3 | 110960 | 110970 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 33436197 |
| 59 | NC_015605 | GAGG | 3 | 113679 | 113690 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 33436197 |
| 60 | NC_015605 | AGGT | 3 | 113891 | 113902 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 33436197 |
| 61 | NC_015605 | TAAG | 3 | 115011 | 115021 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33436197 |
| 62 | NC_015605 | ATTT | 3 | 116090 | 116100 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 33436197 |
| 63 | NC_015605 | GGAA | 3 | 117108 | 117118 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 33436197 |
| 64 | NC_015605 | ATTT | 3 | 118569 | 118579 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 33436197 |
| 65 | NC_015605 | AATT | 3 | 118619 | 118630 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 33436197 |
| 66 | NC_015605 | TTAT | 4 | 121156 | 121172 | 17 | 25 % | 75 % | 0 % | 0 % | 5 % | 33436197 |
| 67 | NC_015605 | AAAC | 3 | 121416 | 121426 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 33436197 |
| 68 | NC_015605 | CTTT | 4 | 122024 | 122038 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | 33436197 |
| 69 | NC_015605 | AAAT | 3 | 123872 | 123882 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 33436197 |
| 70 | NC_015605 | AGAA | 3 | 126987 | 126998 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33436197 |
| 71 | NC_015605 | ATTC | 3 | 134351 | 134362 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 33436197 |
| 72 | NC_015605 | GTAT | 3 | 134770 | 134781 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 33436197 |
| 73 | NC_015605 | TTTC | 3 | 135428 | 135439 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 33436197 |
| 74 | NC_015605 | TTTA | 3 | 135441 | 135451 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 33436197 |
| 75 | NC_015605 | TTCC | 3 | 137849 | 137859 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 33436197 |
| 76 | NC_015605 | ATAA | 4 | 138865 | 138879 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | 33436197 |
| 77 | NC_015605 | CTTA | 3 | 139946 | 139956 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 33436197 |
| 78 | NC_015605 | CCTT | 3 | 143997 | 144007 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 33436197 |
| 79 | NC_015605 | GGAT | 3 | 144341 | 144352 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 33436197 |
| 80 | NC_015605 | ATAA | 4 | 148163 | 148178 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 33436197 |
| 81 | NC_015605 | AGAA | 3 | 154482 | 154492 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 33436201 |
| 82 | NC_015605 | ATCA | 3 | 156503 | 156515 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 33436201 |
| 83 | NC_015605 | TGAT | 3 | 156598 | 156610 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 33436201 |
| 84 | NC_015605 | AAAG | 3 | 158336 | 158346 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 33436201 |
| 85 | NC_015605 | ATTT | 3 | 159396 | 159407 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33436201 |