Tetra-nucleotide Imperfect Repeats of Olea europaea subsp. cuspidata chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_015604 | TCAA | 4 | 324 | 338 | 15 | 50 % | 25 % | 0 % | 25 % | 6 % | Non-Coding |
| 2 | NC_015604 | CTTT | 3 | 359 | 370 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 3 | NC_015604 | AAGT | 3 | 1244 | 1254 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33470026 |
| 4 | NC_015604 | CATT | 3 | 4149 | 4160 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 5 | NC_015604 | AAAT | 3 | 5237 | 5248 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 6 | NC_015604 | AAAT | 3 | 6852 | 6863 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_015604 | ATAA | 3 | 9312 | 9327 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 8 | NC_015604 | TTTA | 3 | 9956 | 9967 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_015604 | ATGA | 3 | 13370 | 13382 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 33470026 |
| 10 | NC_015604 | AAAT | 3 | 13463 | 13473 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 33470026 |
| 11 | NC_015604 | ATTT | 3 | 15398 | 15408 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_015604 | TATT | 3 | 16709 | 16721 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 13 | NC_015604 | TGTT | 3 | 17057 | 17067 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 33470027 |
| 14 | NC_015604 | GAAT | 3 | 23873 | 23883 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33470027 |
| 15 | NC_015604 | CCTA | 3 | 25679 | 25689 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 33470027 |
| 16 | NC_015604 | GTAT | 3 | 32993 | 33005 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 17 | NC_015604 | ATGA | 3 | 33469 | 33479 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 18 | NC_015604 | TTCT | 3 | 34012 | 34023 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 19 | NC_015604 | GAAA | 3 | 36079 | 36090 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33470027 |
| 20 | NC_015604 | GAAT | 3 | 39770 | 39780 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33470028 |
| 21 | NC_015604 | ATTT | 3 | 43686 | 43697 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 22 | NC_015604 | CATA | 3 | 50189 | 50199 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 23 | NC_015604 | CTTT | 3 | 50438 | 50450 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 24 | NC_015604 | TAAA | 3 | 53892 | 53902 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 25 | NC_015604 | TATT | 3 | 56937 | 56947 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 26 | NC_015604 | TGCA | 3 | 58238 | 58250 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 33470029 |
| 27 | NC_015604 | GTTA | 4 | 59136 | 59150 | 15 | 25 % | 50 % | 25 % | 0 % | 6 % | Non-Coding |
| 28 | NC_015604 | TAGA | 3 | 61485 | 61496 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 29 | NC_015604 | TGAA | 3 | 62762 | 62772 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 30 | NC_015604 | GAAA | 3 | 63000 | 63011 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | Non-Coding |
| 31 | NC_015604 | TTTC | 3 | 67478 | 67489 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 32 | NC_015604 | GAAA | 3 | 70425 | 70436 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33470030 |
| 33 | NC_015604 | TGAA | 3 | 71546 | 71557 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 34 | NC_015604 | TTTC | 3 | 71580 | 71592 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 35 | NC_015604 | GGTT | 3 | 76098 | 76109 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 33470030 |
| 36 | NC_015604 | CAAA | 5 | 76743 | 76761 | 19 | 75 % | 0 % | 0 % | 25 % | 10 % | Non-Coding |
| 37 | NC_015604 | CAAT | 3 | 85230 | 85240 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 33470031 |
| 38 | NC_015604 | TTTC | 3 | 86254 | 86264 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33470032 |
| 39 | NC_015604 | ATCG | 3 | 91027 | 91039 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 33470032 |
| 40 | NC_015604 | AATA | 3 | 94161 | 94173 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 33470032 |
| 41 | NC_015604 | TATG | 3 | 96560 | 96571 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 42 | NC_015604 | ATCC | 3 | 104746 | 104757 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 43 | NC_015604 | TCTA | 3 | 105141 | 105152 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 44 | NC_015604 | AAGG | 3 | 105279 | 105289 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | Non-Coding |
| 45 | NC_015604 | GAGG | 3 | 108000 | 108011 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 46 | NC_015604 | AGGT | 3 | 108213 | 108224 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 47 | NC_015604 | TAAG | 3 | 109333 | 109343 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 48 | NC_015604 | ATTT | 3 | 110395 | 110405 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 49 | NC_015604 | GGAA | 3 | 111402 | 111412 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 33470032 |
| 50 | NC_015604 | AAAT | 3 | 120567 | 120578 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 51 | NC_015604 | TCTA | 3 | 122404 | 122415 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 33470033 |
| 52 | NC_015604 | AATC | 3 | 122839 | 122850 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 33470033 |
| 53 | NC_015604 | TTTG | 3 | 126419 | 126430 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 33470034 |
| 54 | NC_015604 | TTTA | 3 | 126490 | 126501 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33470034 |
| 55 | NC_015604 | CATT | 3 | 127363 | 127374 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 33470034 |
| 56 | NC_015604 | AAAG | 3 | 128941 | 128951 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 33470034 |
| 57 | NC_015604 | CTTT | 3 | 129835 | 129845 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33470034 |
| 58 | NC_015604 | TTCC | 3 | 131063 | 131073 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 33470034 |
| 59 | NC_015604 | ATAA | 4 | 132068 | 132082 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 60 | NC_015604 | CTTA | 3 | 133132 | 133142 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 61 | NC_015604 | CCTT | 3 | 137186 | 137196 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | Non-Coding |
| 62 | NC_015604 | GGAT | 3 | 137718 | 137729 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 63 | NC_015604 | TATT | 3 | 148302 | 148314 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 33470034 |
| 64 | NC_015604 | TGAT | 3 | 149313 | 149325 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 33470034 |
| 65 | NC_015604 | CGAT | 3 | 151436 | 151448 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 33470034 |
| 66 | NC_015604 | ATTT | 3 | 152066 | 152077 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33470034 |