Penta-nucleotide Imperfect Repeats of Jacobaea vulgaris chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_015543 | TCTCT | 3 | 5247 | 5260 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | 33470230 |
2 | NC_015543 | ACAAA | 3 | 30176 | 30190 | 15 | 80 % | 0 % | 0 % | 20 % | 6 % | Non-Coding |
3 | NC_015543 | TTTAT | 3 | 42067 | 42082 | 16 | 20 % | 80 % | 0 % | 0 % | 6 % | 33470232 |
4 | NC_015543 | TTTCT | 3 | 42460 | 42473 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 33470232 |
5 | NC_015543 | ATTTT | 3 | 48029 | 48043 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
6 | NC_015543 | TCTTT | 3 | 63856 | 63869 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
7 | NC_015543 | AAGAA | 3 | 67061 | 67074 | 14 | 80 % | 0 % | 20 % | 0 % | 7 % | Non-Coding |
8 | NC_015543 | AAAAT | 3 | 67082 | 67095 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | Non-Coding |
9 | NC_015543 | CTTTT | 3 | 82143 | 82156 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | 33470234 |
10 | NC_015543 | TTTCG | 3 | 95223 | 95236 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | 33470234 |
11 | NC_015543 | GAAAT | 3 | 108699 | 108712 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | 33470238 |
12 | NC_015543 | ATCAA | 3 | 110182 | 110195 | 14 | 60 % | 20 % | 0 % | 20 % | 7 % | 33470238 |
13 | NC_015543 | AATTT | 3 | 116937 | 116950 | 14 | 40 % | 60 % | 0 % | 0 % | 7 % | 33470238 |
14 | NC_015543 | ATTTT | 3 | 121512 | 121525 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | 33470238 |
15 | NC_015543 | TACAT | 4 | 141652 | 141671 | 20 | 40 % | 40 % | 0 % | 20 % | 10 % | Non-Coding |