Tetra-nucleotide Imperfect Repeats of Jacobaea vulgaris chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_015543 | AAGT | 3 | 1046 | 1056 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33470230 |
| 2 | NC_015543 | AAAG | 3 | 1559 | 1569 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 3 | NC_015543 | TAAA | 3 | 1707 | 1718 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_015543 | CTTT | 3 | 3928 | 3938 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 5 | NC_015543 | AAAT | 3 | 4399 | 4409 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_015543 | AATA | 3 | 4487 | 4497 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 7 | NC_015543 | ATTT | 3 | 4887 | 4897 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 8 | NC_015543 | GAAA | 3 | 7032 | 7043 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 9 | NC_015543 | TTCT | 3 | 7681 | 7691 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33470230 |
| 10 | NC_015543 | TAGG | 3 | 14833 | 14843 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | 33470231 |
| 11 | NC_015543 | ATTC | 3 | 16621 | 16631 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 12 | NC_015543 | ACTA | 3 | 21637 | 21648 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 33470231 |
| 13 | NC_015543 | AACA | 3 | 23372 | 23382 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 33470231 |
| 14 | NC_015543 | ACTT | 3 | 24049 | 24059 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 33470231 |
| 15 | NC_015543 | ATTT | 4 | 29405 | 29420 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 16 | NC_015543 | AATG | 3 | 29628 | 29638 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 17 | NC_015543 | AATA | 3 | 29698 | 29710 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 18 | NC_015543 | GAAA | 3 | 33456 | 33467 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33470232 |
| 19 | NC_015543 | TGTA | 3 | 35015 | 35025 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 20 | NC_015543 | TTAA | 3 | 35798 | 35809 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 21 | NC_015543 | AATG | 3 | 39383 | 39394 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 33470232 |
| 22 | NC_015543 | CTTT | 3 | 42560 | 42570 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33470232 |
| 23 | NC_015543 | ATTT | 3 | 43434 | 43445 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33470232 |
| 24 | NC_015543 | AAAT | 3 | 47819 | 47829 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 25 | NC_015543 | TTTA | 3 | 50057 | 50067 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 26 | NC_015543 | TGAT | 3 | 57956 | 57966 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 27 | NC_015543 | AAAT | 3 | 58024 | 58034 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 28 | NC_015543 | ATAA | 3 | 61927 | 61937 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 29 | NC_015543 | TTTG | 3 | 62963 | 62974 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 33470233 |
| 30 | NC_015543 | AGTA | 3 | 65314 | 65324 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 31 | NC_015543 | ATCT | 3 | 66115 | 66126 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 32 | NC_015543 | TGAA | 3 | 67614 | 67625 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 33470234 |
| 33 | NC_015543 | TATT | 3 | 67767 | 67777 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 34 | NC_015543 | AAGA | 3 | 68945 | 68956 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33470234 |
| 35 | NC_015543 | AAAT | 3 | 69034 | 69045 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 33470234 |
| 36 | NC_015543 | TTTA | 3 | 69133 | 69144 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33470234 |
| 37 | NC_015543 | GATT | 4 | 70249 | 70264 | 16 | 25 % | 50 % | 25 % | 0 % | 6 % | 33470234 |
| 38 | NC_015543 | TTGA | 3 | 70491 | 70501 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 33470234 |
| 39 | NC_015543 | GGTT | 3 | 72123 | 72134 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 33470234 |
| 40 | NC_015543 | AAGT | 3 | 74198 | 74208 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33470234 |
| 41 | NC_015543 | AGAA | 3 | 75695 | 75706 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33470234 |
| 42 | NC_015543 | AATC | 4 | 76892 | 76907 | 16 | 50 % | 25 % | 0 % | 25 % | 6 % | 33470234 |
| 43 | NC_015543 | ACTA | 3 | 80483 | 80493 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 33470234 |
| 44 | NC_015543 | ATCA | 3 | 80723 | 80734 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 33470234 |
| 45 | NC_015543 | TTAT | 5 | 81198 | 81218 | 21 | 25 % | 75 % | 0 % | 0 % | 4 % | 33470234 |
| 46 | NC_015543 | CAAT | 3 | 81512 | 81522 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 33470234 |
| 47 | NC_015543 | ATTT | 4 | 86663 | 86678 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | 33470234 |
| 48 | NC_015543 | TGAT | 3 | 89399 | 89411 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 33470234 |
| 49 | NC_015543 | AACT | 3 | 89962 | 89972 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 33470234 |
| 50 | NC_015543 | AATA | 3 | 90234 | 90246 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 33470234 |
| 51 | NC_015543 | CCCT | 3 | 96486 | 96496 | 11 | 0 % | 25 % | 0 % | 75 % | 9 % | 33470234 |
| 52 | NC_015543 | ATCC | 3 | 100844 | 100855 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 33470238 |
| 53 | NC_015543 | TCTA | 3 | 101068 | 101079 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 33470238 |
| 54 | NC_015543 | AAGG | 3 | 101206 | 101216 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 33470238 |
| 55 | NC_015543 | GAGG | 3 | 103937 | 103948 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 33470238 |
| 56 | NC_015543 | AGGT | 3 | 104149 | 104160 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 33470238 |
| 57 | NC_015543 | TAAG | 3 | 105269 | 105279 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33470238 |
| 58 | NC_015543 | GAAA | 3 | 107887 | 107898 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 33470238 |
| 59 | NC_015543 | AAAT | 3 | 108032 | 108042 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 33470238 |
| 60 | NC_015543 | ATTT | 3 | 111151 | 111161 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 33470238 |
| 61 | NC_015543 | AATA | 3 | 112244 | 112255 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 33470238 |
| 62 | NC_015543 | ATTT | 3 | 112364 | 112375 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 33470238 |
| 63 | NC_015543 | AAGT | 3 | 112433 | 112443 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33470238 |
| 64 | NC_015543 | GCTT | 3 | 112544 | 112555 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 33470238 |
| 65 | NC_015543 | AAAT | 3 | 114359 | 114369 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 33470238 |
| 66 | NC_015543 | GATT | 3 | 114694 | 114705 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 33470238 |
| 67 | NC_015543 | AAAT | 3 | 115344 | 115355 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 33470238 |
| 68 | NC_015543 | CTAT | 3 | 116763 | 116774 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 33470238 |
| 69 | NC_015543 | CCAT | 3 | 116910 | 116921 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 33470238 |
| 70 | NC_015543 | ATTT | 3 | 117040 | 117051 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 33470238 |
| 71 | NC_015543 | TTTC | 3 | 117665 | 117675 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 33470238 |
| 72 | NC_015543 | TATT | 3 | 120019 | 120030 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | 33470238 |
| 73 | NC_015543 | TAAA | 3 | 122069 | 122081 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 33470238 |
| 74 | NC_015543 | AATT | 3 | 122138 | 122149 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 33470238 |
| 75 | NC_015543 | TAAA | 3 | 122271 | 122282 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 33470238 |
| 76 | NC_015543 | AAAT | 3 | 122883 | 122895 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 33470238 |
| 77 | NC_015543 | AAAT | 3 | 125627 | 125637 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 33470238 |
| 78 | NC_015543 | CTTA | 3 | 128264 | 128274 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 33470238 |
| 79 | NC_015543 | CCTT | 3 | 132327 | 132337 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 33470238 |
| 80 | NC_015543 | GGAT | 3 | 132688 | 132699 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 33470238 |
| 81 | NC_015543 | TATT | 3 | 143297 | 143309 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 33470238 |
| 82 | NC_015543 | TAGT | 3 | 143570 | 143580 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 33470238 |
| 83 | NC_015543 | TGAT | 3 | 144269 | 144281 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 33470238 |
| 84 | NC_015543 | ATTT | 3 | 147025 | 147036 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33470238 |