Tri-nucleotide Imperfect Repeats of Jacobaea vulgaris chloroplast
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_015543 | TCT | 4 | 676 | 686 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 33470230 |
2 | NC_015543 | TAT | 4 | 1896 | 1907 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
3 | NC_015543 | TTC | 4 | 2082 | 2093 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 33470230 |
4 | NC_015543 | GAA | 4 | 2887 | 2898 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 33470230 |
5 | NC_015543 | ATA | 4 | 4421 | 4433 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | Non-Coding |
6 | NC_015543 | ATA | 4 | 4669 | 4680 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
7 | NC_015543 | AGA | 4 | 4753 | 4764 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | Non-Coding |
8 | NC_015543 | CTT | 4 | 6835 | 6845 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | Non-Coding |
9 | NC_015543 | TAT | 4 | 7980 | 7990 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | Non-Coding |
10 | NC_015543 | AAG | 4 | 12048 | 12060 | 13 | 66.67 % | 0 % | 33.33 % | 0 % | 7 % | Non-Coding |
11 | NC_015543 | GAA | 4 | 17133 | 17144 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | Non-Coding |
12 | NC_015543 | GAA | 4 | 17179 | 17189 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | Non-Coding |
13 | NC_015543 | TAA | 5 | 23714 | 23728 | 15 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | Non-Coding |
14 | NC_015543 | GTT | 5 | 24533 | 24547 | 15 | 0 % | 66.67 % | 33.33 % | 0 % | 6 % | 33470231 |
15 | NC_015543 | TGT | 4 | 28018 | 28029 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 33470231 |
16 | NC_015543 | TAA | 5 | 31778 | 31792 | 15 | 66.67 % | 33.33 % | 0 % | 0 % | 6 % | Non-Coding |
17 | NC_015543 | TTA | 4 | 32262 | 32273 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 33470231 |
18 | NC_015543 | GAG | 4 | 33576 | 33586 | 11 | 33.33 % | 0 % | 66.67 % | 0 % | 9 % | 33470232 |
19 | NC_015543 | TTC | 4 | 34306 | 34317 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 0 % | 33470232 |
20 | NC_015543 | ATG | 4 | 37890 | 37900 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 33470232 |
21 | NC_015543 | AGA | 5 | 44282 | 44295 | 14 | 66.67 % | 0 % | 33.33 % | 0 % | 7 % | Non-Coding |
22 | NC_015543 | CTT | 4 | 45541 | 45552 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | Non-Coding |
23 | NC_015543 | ATT | 5 | 45561 | 45576 | 16 | 33.33 % | 66.67 % | 0 % | 0 % | 6 % | Non-Coding |
24 | NC_015543 | TAT | 4 | 47617 | 47628 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
25 | NC_015543 | TAT | 4 | 50038 | 50049 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
26 | NC_015543 | TTC | 4 | 51136 | 51146 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | Non-Coding |
27 | NC_015543 | TTG | 4 | 54326 | 54336 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | Non-Coding |
28 | NC_015543 | TTC | 4 | 61751 | 61762 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 33470233 |
29 | NC_015543 | ATT | 4 | 62377 | 62389 | 13 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | Non-Coding |
30 | NC_015543 | TTA | 4 | 62497 | 62508 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | Non-Coding |
31 | NC_015543 | TTC | 4 | 64329 | 64340 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | Non-Coding |
32 | NC_015543 | ATA | 4 | 65514 | 65525 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
33 | NC_015543 | TAA | 4 | 66888 | 66899 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 33470234 |
34 | NC_015543 | ATA | 4 | 69311 | 69321 | 11 | 66.67 % | 33.33 % | 0 % | 0 % | 9 % | 33470234 |
35 | NC_015543 | TCT | 4 | 72494 | 72505 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 33470234 |
36 | NC_015543 | AAT | 4 | 74015 | 74027 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 33470234 |
37 | NC_015543 | CTG | 4 | 77496 | 77508 | 13 | 0 % | 33.33 % | 33.33 % | 33.33 % | 7 % | 33470234 |
38 | NC_015543 | ATA | 4 | 77565 | 77576 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | 33470234 |
39 | NC_015543 | GAA | 4 | 78306 | 78316 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 33470234 |
40 | NC_015543 | TAT | 5 | 81211 | 81224 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 33470234 |
41 | NC_015543 | TAT | 5 | 82586 | 82599 | 14 | 33.33 % | 66.67 % | 0 % | 0 % | 7 % | 33470234 |
42 | NC_015543 | GAT | 4 | 84849 | 84859 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 33470234 |
43 | NC_015543 | TTC | 4 | 97009 | 97020 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 33470238 |
44 | NC_015543 | GAA | 5 | 107217 | 107231 | 15 | 66.67 % | 0 % | 33.33 % | 0 % | 6 % | 33470238 |
45 | NC_015543 | GAA | 7 | 107832 | 107852 | 21 | 66.67 % | 0 % | 33.33 % | 0 % | 4 % | 33470238 |
46 | NC_015543 | AGA | 4 | 109916 | 109926 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 33470238 |
47 | NC_015543 | ATT | 4 | 112257 | 112268 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 33470238 |
48 | NC_015543 | CTT | 4 | 114489 | 114499 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 33470238 |
49 | NC_015543 | TAA | 4 | 114785 | 114797 | 13 | 66.67 % | 33.33 % | 0 % | 0 % | 7 % | 33470238 |
50 | NC_015543 | TAT | 4 | 115333 | 115343 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 33470238 |
51 | NC_015543 | AGA | 5 | 115726 | 115740 | 15 | 66.67 % | 0 % | 33.33 % | 0 % | 6 % | 33470238 |
52 | NC_015543 | CTA | 4 | 118288 | 118299 | 12 | 33.33 % | 33.33 % | 0 % | 33.33 % | 8 % | 33470238 |
53 | NC_015543 | AGT | 4 | 120390 | 120400 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 33470238 |
54 | NC_015543 | CCA | 5 | 122237 | 122250 | 14 | 33.33 % | 0 % | 0 % | 66.67 % | 7 % | 33470238 |
55 | NC_015543 | TTA | 4 | 123402 | 123413 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 33470238 |
56 | NC_015543 | CTT | 4 | 123754 | 123765 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | 33470238 |
57 | NC_015543 | TTC | 6 | 126308 | 126326 | 19 | 0 % | 66.67 % | 0 % | 33.33 % | 10 % | 33470238 |
58 | NC_015543 | GAA | 4 | 136523 | 136534 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 8 % | 33470238 |