Tetra-nucleotide Imperfect Repeats of Fistulifera sp. JPCC DA0580 chloroplast
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_015403 | CTTT | 3 | 832 | 843 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 33085081 |
| 2 | NC_015403 | AATT | 3 | 3751 | 3763 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 33085081 |
| 3 | NC_015403 | TAAA | 3 | 3822 | 3832 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 33085081 |
| 4 | NC_015403 | ATAA | 3 | 5237 | 5248 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 33085081 |
| 5 | NC_015403 | TTTA | 3 | 9973 | 9983 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 6 | NC_015403 | AATT | 3 | 12005 | 12016 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 33085082 |
| 7 | NC_015403 | CGAA | 3 | 15425 | 15435 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 33085083 |
| 8 | NC_015403 | CTGG | 3 | 16856 | 16866 | 11 | 0 % | 25 % | 50 % | 25 % | 9 % | 33085083 |
| 9 | NC_015403 | ATCT | 3 | 17056 | 17068 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | 33085083 |
| 10 | NC_015403 | ATTT | 3 | 20266 | 20277 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 11 | NC_015403 | AATT | 3 | 20715 | 20725 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 12 | NC_015403 | ATTT | 3 | 20869 | 20879 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 33085084 |
| 13 | NC_015403 | AATT | 3 | 21357 | 21369 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 33085084 |
| 14 | NC_015403 | AATT | 3 | 22855 | 22865 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 15 | NC_015403 | AAAT | 4 | 22881 | 22896 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 16 | NC_015403 | AAAT | 3 | 26950 | 26962 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 33085084 |
| 17 | NC_015403 | ATAA | 3 | 28542 | 28552 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 18 | NC_015403 | AGTA | 3 | 30985 | 30996 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 19 | NC_015403 | AAGA | 4 | 31511 | 31526 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | 33085084 |
| 20 | NC_015403 | GAAA | 3 | 31709 | 31719 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 33085084 |
| 21 | NC_015403 | AAAT | 3 | 32009 | 32020 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 33085084 |
| 22 | NC_015403 | TAAA | 3 | 33532 | 33542 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 23 | NC_015403 | AATA | 3 | 35549 | 35560 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 24 | NC_015403 | ATAA | 3 | 37001 | 37012 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 25 | NC_015403 | AGGT | 3 | 37034 | 37045 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 26 | NC_015403 | TACG | 3 | 41201 | 41211 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | 33085085 |
| 27 | NC_015403 | GTGC | 3 | 43075 | 43085 | 11 | 0 % | 25 % | 50 % | 25 % | 9 % | 33085085 |
| 28 | NC_015403 | ATTG | 3 | 44770 | 44781 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 33085085 |
| 29 | NC_015403 | TTTA | 3 | 48170 | 48180 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 33085086 |
| 30 | NC_015403 | ATTT | 3 | 49871 | 49882 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33085086 |
| 31 | NC_015403 | TAAT | 3 | 50567 | 50577 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 33085086 |
| 32 | NC_015403 | TTTA | 3 | 52329 | 52340 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 33 | NC_015403 | TTTG | 3 | 54351 | 54362 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 33085087 |
| 34 | NC_015403 | ATTA | 3 | 56077 | 56087 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 33085087 |
| 35 | NC_015403 | ATTT | 3 | 56411 | 56422 | 12 | 25 % | 75 % | 0 % | 0 % | 0 % | Non-Coding |
| 36 | NC_015403 | TAGT | 3 | 57009 | 57021 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 33085087 |
| 37 | NC_015403 | GTTT | 3 | 57460 | 57471 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 33085088 |
| 38 | NC_015403 | TTAA | 3 | 58611 | 58622 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 33085088 |
| 39 | NC_015403 | CAAA | 3 | 62144 | 62154 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 33085088 |
| 40 | NC_015403 | AATT | 3 | 63560 | 63571 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 33085088 |
| 41 | NC_015403 | TAAA | 3 | 64165 | 64175 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 42 | NC_015403 | AATT | 3 | 66217 | 66228 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 43 | NC_015403 | TTAA | 3 | 66987 | 66998 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | Non-Coding |
| 44 | NC_015403 | ATTT | 3 | 68122 | 68134 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 45 | NC_015403 | ATTC | 3 | 69795 | 69805 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 33085089 |
| 46 | NC_015403 | CTAT | 3 | 75054 | 75066 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 47 | NC_015403 | ATGA | 3 | 76155 | 76167 | 13 | 50 % | 25 % | 25 % | 0 % | 7 % | 33085089 |
| 48 | NC_015403 | AAAC | 3 | 76206 | 76217 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 33085089 |
| 49 | NC_015403 | GTTC | 3 | 77335 | 77345 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 33085089 |
| 50 | NC_015403 | TATT | 3 | 79776 | 79787 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 33085089 |
| 51 | NC_015403 | AATT | 3 | 82397 | 82408 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 52 | NC_015403 | AAGT | 3 | 83412 | 83423 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | 33085090 |
| 53 | NC_015403 | TATT | 3 | 87508 | 87519 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 54 | NC_015403 | CTTT | 3 | 88425 | 88435 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 55 | NC_015403 | TTTA | 3 | 89526 | 89536 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 56 | NC_015403 | TTCT | 4 | 91539 | 91554 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 33085090 |
| 57 | NC_015403 | ATTT | 3 | 92415 | 92425 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 58 | NC_015403 | TAAA | 3 | 93738 | 93748 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 59 | NC_015403 | TTGT | 3 | 95490 | 95501 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 60 | NC_015403 | AATT | 3 | 95717 | 95727 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 61 | NC_015403 | TCAC | 3 | 95836 | 95846 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | Non-Coding |
| 62 | NC_015403 | TAAA | 3 | 96663 | 96673 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 33085090 |
| 63 | NC_015403 | AAAT | 3 | 102009 | 102020 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 33085090 |
| 64 | NC_015403 | TTAA | 3 | 102088 | 102098 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 33085090 |
| 65 | NC_015403 | AAAG | 3 | 103253 | 103264 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 66 | NC_015403 | AATT | 3 | 103366 | 103377 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 67 | NC_015403 | ATAA | 3 | 105789 | 105800 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 68 | NC_015403 | TTGA | 3 | 110473 | 110483 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 69 | NC_015403 | TAAA | 3 | 116108 | 116118 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 70 | NC_015403 | TTTA | 3 | 116132 | 116142 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 33085093 |
| 71 | NC_015403 | TAAT | 3 | 117926 | 117937 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 33085093 |
| 72 | NC_015403 | TAAT | 3 | 117947 | 117958 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 33085093 |
| 73 | NC_015403 | GCAA | 3 | 121570 | 121580 | 11 | 50 % | 0 % | 25 % | 25 % | 9 % | 33085093 |
| 74 | NC_015403 | GAAC | 3 | 125091 | 125102 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | 33085094 |
| 75 | NC_015403 | GCTT | 3 | 128252 | 128262 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 33085094 |
| 76 | NC_015403 | AATT | 3 | 130710 | 130720 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 33085094 |
| 77 | NC_015403 | ATTT | 3 | 131171 | 131181 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 33085094 |
| 78 | NC_015403 | AATT | 3 | 132150 | 132160 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 33085094 |
| 79 | NC_015403 | GAAT | 3 | 133667 | 133677 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 33085095 |