All Imperfect Repeats of Chlorella variabilis plastid
Click on Table Heading To Sort Results Accordingly
S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_015359 | CCGA | 3 | 806 | 818 | 13 | 25 % | 0 % | 25 % | 50 % | 7 % | Non-Coding |
2 | NC_015359 | CTGA | 3 | 1941 | 1951 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
3 | NC_015359 | CAAA | 3 | 2977 | 2987 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
4 | NC_015359 | TTTA | 3 | 3191 | 3201 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
5 | NC_015359 | AAAT | 3 | 4558 | 4568 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
6 | NC_015359 | T | 12 | 6081 | 6092 | 12 | 0 % | 100 % | 0 % | 0 % | 0 % | Non-Coding |
7 | NC_015359 | TAT | 4 | 6724 | 6735 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 33126809 |
8 | NC_015359 | CTTTT | 3 | 7099 | 7113 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | Non-Coding |
9 | NC_015359 | GAAA | 3 | 12603 | 12614 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
10 | NC_015359 | AAAC | 3 | 13886 | 13897 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
11 | NC_015359 | GAAA | 3 | 14947 | 14957 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
12 | NC_015359 | GAAA | 3 | 15763 | 15774 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
13 | NC_015359 | AAAC | 3 | 16005 | 16015 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
14 | NC_015359 | TTTG | 3 | 16947 | 16958 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 33126810 |
15 | NC_015359 | AAAC | 3 | 17116 | 17127 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 33126810 |
16 | NC_015359 | ATT | 4 | 18379 | 18389 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 33126810 |
17 | NC_015359 | TTAAAA | 3 | 18552 | 18569 | 18 | 66.67 % | 33.33 % | 0 % | 0 % | 5 % | 33126810 |
18 | NC_015359 | AAAT | 3 | 21057 | 21068 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
19 | NC_015359 | N | 50 | 23135 | 23184 | 50 | 0 % | 0 % | 0 % | 0 % | 0 % | Non-Coding |
20 | NC_015359 | TGT | 4 | 24931 | 24942 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | 33126810 |
21 | NC_015359 | GGT | 4 | 25127 | 25138 | 12 | 0 % | 33.33 % | 66.67 % | 0 % | 8 % | 33126810 |
22 | NC_015359 | TTTC | 3 | 27554 | 27565 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 33126811 |
23 | NC_015359 | ACA | 4 | 27710 | 27722 | 13 | 66.67 % | 0 % | 0 % | 33.33 % | 7 % | 33126811 |
24 | NC_015359 | T | 15 | 28499 | 28513 | 15 | 0 % | 100 % | 0 % | 0 % | 6 % | Non-Coding |
25 | NC_015359 | CAGGAA | 7 | 29065 | 29106 | 42 | 50 % | 0 % | 33.33 % | 16.67 % | 9 % | Non-Coding |
26 | NC_015359 | CAG | 5 | 29298 | 29312 | 15 | 33.33 % | 0 % | 33.33 % | 33.33 % | 6 % | Non-Coding |
27 | NC_015359 | CTTT | 3 | 29921 | 29932 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
28 | NC_015359 | GTT | 4 | 30438 | 30448 | 11 | 0 % | 66.67 % | 33.33 % | 0 % | 9 % | Non-Coding |
29 | NC_015359 | CAC | 4 | 30698 | 30708 | 11 | 33.33 % | 0 % | 0 % | 66.67 % | 9 % | Non-Coding |
30 | NC_015359 | AAT | 4 | 30810 | 30821 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
31 | NC_015359 | TTTC | 3 | 30977 | 30988 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
32 | NC_015359 | TCCA | 3 | 31427 | 31438 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
33 | NC_015359 | T | 12 | 32851 | 32862 | 12 | 0 % | 100 % | 0 % | 0 % | 0 % | 33126811 |
34 | NC_015359 | ATAA | 3 | 35725 | 35735 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 33126811 |
35 | NC_015359 | TGA | 4 | 36219 | 36229 | 11 | 33.33 % | 33.33 % | 33.33 % | 0 % | 9 % | 33126811 |
36 | NC_015359 | AGA | 4 | 36367 | 36377 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 33126811 |
37 | NC_015359 | A | 16 | 36847 | 36862 | 16 | 100 % | 0 % | 0 % | 0 % | 6 % | Non-Coding |
38 | NC_015359 | AAAT | 3 | 38637 | 38647 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
39 | NC_015359 | TTAA | 3 | 40047 | 40057 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
40 | NC_015359 | N | 100 | 43265 | 43364 | 100 | 0 % | 0 % | 0 % | 0 % | 0 % | Non-Coding |
41 | NC_015359 | TAA | 4 | 43539 | 43550 | 12 | 66.67 % | 33.33 % | 0 % | 0 % | 8 % | Non-Coding |
42 | NC_015359 | ACA | 4 | 43728 | 43739 | 12 | 66.67 % | 0 % | 0 % | 33.33 % | 8 % | 33126811 |
43 | NC_015359 | ATT | 4 | 44410 | 44420 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 33126811 |
44 | NC_015359 | AAAT | 3 | 44730 | 44740 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
45 | NC_015359 | GT | 6 | 45744 | 45755 | 12 | 0 % | 50 % | 50 % | 0 % | 8 % | 33126811 |
46 | NC_015359 | AAGA | 3 | 46456 | 46466 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
47 | NC_015359 | GTTT | 3 | 49364 | 49376 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
48 | NC_015359 | TGCTTT | 3 | 51226 | 51243 | 18 | 0 % | 66.67 % | 16.67 % | 16.67 % | 5 % | 33126812 |
49 | NC_015359 | AGA | 4 | 51251 | 51262 | 12 | 66.67 % | 0 % | 33.33 % | 0 % | 0 % | 33126812 |
50 | NC_015359 | GAA | 4 | 51952 | 51964 | 13 | 66.67 % | 0 % | 33.33 % | 0 % | 7 % | 33126812 |
51 | NC_015359 | CATG | 3 | 54260 | 54271 | 12 | 25 % | 25 % | 25 % | 25 % | 8 % | 33126812 |
52 | NC_015359 | ATAAA | 3 | 55989 | 56002 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | 33126812 |
53 | NC_015359 | N | 50 | 56732 | 56781 | 50 | 0 % | 0 % | 0 % | 0 % | 0 % | Non-Coding |
54 | NC_015359 | TGTT | 3 | 60040 | 60051 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 33126812 |
55 | NC_015359 | AT | 6 | 61013 | 61024 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
56 | NC_015359 | ATCC | 3 | 61135 | 61145 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | Non-Coding |
57 | NC_015359 | TTATT | 3 | 61396 | 61411 | 16 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
58 | NC_015359 | TCTTT | 3 | 61508 | 61521 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
59 | NC_015359 | CGAAA | 3 | 61809 | 61823 | 15 | 60 % | 0 % | 20 % | 20 % | 6 % | Non-Coding |
60 | NC_015359 | TTAT | 3 | 62313 | 62325 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
61 | NC_015359 | AATA | 3 | 63722 | 63732 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 33126812 |
62 | NC_015359 | TTTTC | 3 | 64105 | 64118 | 14 | 0 % | 80 % | 0 % | 20 % | 7 % | Non-Coding |
63 | NC_015359 | AAAC | 3 | 64170 | 64180 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
64 | NC_015359 | GAAAA | 4 | 64247 | 64265 | 19 | 80 % | 0 % | 20 % | 0 % | 5 % | Non-Coding |
65 | NC_015359 | ATTTT | 3 | 65319 | 65333 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
66 | NC_015359 | TAAA | 3 | 65346 | 65356 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
67 | NC_015359 | AGAA | 3 | 65364 | 65375 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
68 | NC_015359 | AAAG | 3 | 65872 | 65883 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | Non-Coding |
69 | NC_015359 | AAAG | 3 | 68543 | 68553 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 33126813 |
70 | NC_015359 | CAA | 4 | 70218 | 70228 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | Non-Coding |
71 | NC_015359 | AAAC | 3 | 72637 | 72648 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
72 | NC_015359 | AAAT | 3 | 73556 | 73566 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
73 | NC_015359 | CAA | 4 | 74050 | 74060 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | 33126813 |
74 | NC_015359 | GAAA | 3 | 76393 | 76403 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
75 | NC_015359 | ATTT | 3 | 80206 | 80216 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
76 | NC_015359 | GAA | 4 | 80466 | 80476 | 11 | 66.67 % | 0 % | 33.33 % | 0 % | 9 % | 33126814 |
77 | NC_015359 | ATT | 4 | 80977 | 80987 | 11 | 33.33 % | 66.67 % | 0 % | 0 % | 9 % | 33126814 |
78 | NC_015359 | TA | 6 | 81302 | 81312 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
79 | NC_015359 | AC | 6 | 81754 | 81765 | 12 | 50 % | 0 % | 0 % | 50 % | 8 % | 33126814 |
80 | NC_015359 | GGGC | 3 | 82326 | 82337 | 12 | 0 % | 0 % | 75 % | 25 % | 8 % | 33126814 |
81 | NC_015359 | AGT | 4 | 82708 | 82719 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | 33126814 |
82 | NC_015359 | TTAA | 3 | 83299 | 83310 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 33126814 |
83 | NC_015359 | AAATA | 3 | 84137 | 84151 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | 33126814 |
84 | NC_015359 | ATTT | 3 | 84656 | 84666 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
85 | NC_015359 | AAAGAA | 3 | 87068 | 87085 | 18 | 83.33 % | 0 % | 16.67 % | 0 % | 5 % | 33126815 |
86 | NC_015359 | ATT | 4 | 87087 | 87098 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 33126815 |
87 | NC_015359 | T | 12 | 87301 | 87312 | 12 | 0 % | 100 % | 0 % | 0 % | 0 % | Non-Coding |
88 | NC_015359 | A | 15 | 87328 | 87342 | 15 | 100 % | 0 % | 0 % | 0 % | 6 % | Non-Coding |
89 | NC_015359 | ACA | 4 | 90260 | 90270 | 11 | 66.67 % | 0 % | 0 % | 33.33 % | 9 % | 33126815 |
90 | NC_015359 | TTTG | 3 | 92309 | 92319 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
91 | NC_015359 | CTG | 4 | 93525 | 93535 | 11 | 0 % | 33.33 % | 33.33 % | 33.33 % | 9 % | 33126815 |
92 | NC_015359 | A | 15 | 94255 | 94269 | 15 | 100 % | 0 % | 0 % | 0 % | 6 % | 33126815 |
93 | NC_015359 | CCTTTT | 3 | 94519 | 94536 | 18 | 0 % | 66.67 % | 0 % | 33.33 % | 5 % | Non-Coding |
94 | NC_015359 | TTA | 4 | 95349 | 95360 | 12 | 33.33 % | 66.67 % | 0 % | 0 % | 8 % | 33126816 |
95 | NC_015359 | ATTT | 3 | 95786 | 95798 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 33126816 |
96 | NC_015359 | TGG | 4 | 97865 | 97876 | 12 | 0 % | 33.33 % | 66.67 % | 0 % | 8 % | 33126816 |
97 | NC_015359 | TCT | 4 | 98515 | 98525 | 11 | 0 % | 66.67 % | 0 % | 33.33 % | 9 % | 33126816 |
98 | NC_015359 | TGC | 4 | 98558 | 98569 | 12 | 0 % | 33.33 % | 33.33 % | 33.33 % | 8 % | 33126816 |
99 | NC_015359 | TGT | 4 | 98922 | 98933 | 12 | 0 % | 66.67 % | 33.33 % | 0 % | 8 % | Non-Coding |
100 | NC_015359 | GTTT | 3 | 98938 | 98949 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
101 | NC_015359 | TC | 6 | 99233 | 99244 | 12 | 0 % | 50 % | 0 % | 50 % | 8 % | Non-Coding |
102 | NC_015359 | T | 12 | 99417 | 99428 | 12 | 0 % | 100 % | 0 % | 0 % | 0 % | Non-Coding |
103 | NC_015359 | A | 12 | 99472 | 99483 | 12 | 100 % | 0 % | 0 % | 0 % | 8 % | Non-Coding |
104 | NC_015359 | AAAC | 3 | 99526 | 99536 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | Non-Coding |
105 | NC_015359 | GGAT | 3 | 101093 | 101103 | 11 | 25 % | 25 % | 50 % | 0 % | 9 % | Non-Coding |
106 | NC_015359 | TCAAA | 3 | 103010 | 103024 | 15 | 60 % | 20 % | 0 % | 20 % | 0 % | Non-Coding |
107 | NC_015359 | CAAA | 3 | 107827 | 107837 | 11 | 75 % | 0 % | 0 % | 25 % | 9 % | 33126817 |
108 | NC_015359 | TTTTGT | 3 | 109709 | 109727 | 19 | 0 % | 83.33 % | 16.67 % | 0 % | 10 % | Non-Coding |
109 | NC_015359 | T | 12 | 109933 | 109944 | 12 | 0 % | 100 % | 0 % | 0 % | 8 % | Non-Coding |
110 | NC_015359 | GAAA | 4 | 111144 | 111159 | 16 | 75 % | 0 % | 25 % | 0 % | 6 % | Non-Coding |
111 | NC_015359 | A | 14 | 112016 | 112029 | 14 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
112 | NC_015359 | ATCT | 3 | 112495 | 112506 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | Non-Coding |
113 | NC_015359 | GTTT | 3 | 113494 | 113504 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
114 | NC_015359 | ATTT | 3 | 113940 | 113951 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
115 | NC_015359 | A | 13 | 114172 | 114184 | 13 | 100 % | 0 % | 0 % | 0 % | 7 % | Non-Coding |
116 | NC_015359 | T | 12 | 116509 | 116520 | 12 | 0 % | 100 % | 0 % | 0 % | 0 % | Non-Coding |
117 | NC_015359 | TTTC | 3 | 116577 | 116588 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
118 | NC_015359 | TGC | 4 | 117338 | 117348 | 11 | 0 % | 33.33 % | 33.33 % | 33.33 % | 9 % | 33126817 |
119 | NC_015359 | AATT | 3 | 117581 | 117592 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 33126817 |
120 | NC_015359 | TTTCC | 3 | 117962 | 117976 | 15 | 0 % | 60 % | 0 % | 40 % | 6 % | Non-Coding |
121 | NC_015359 | AAAG | 3 | 118102 | 118112 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
122 | NC_015359 | T | 13 | 118273 | 118285 | 13 | 0 % | 100 % | 0 % | 0 % | 7 % | Non-Coding |
123 | NC_015359 | N | 64 | 119441 | 119504 | 64 | 0 % | 0 % | 0 % | 0 % | 0 % | Non-Coding |
124 | NC_015359 | TAG | 5 | 119932 | 119946 | 15 | 33.33 % | 33.33 % | 33.33 % | 0 % | 6 % | Non-Coding |
125 | NC_015359 | TGA | 4 | 120158 | 120169 | 12 | 33.33 % | 33.33 % | 33.33 % | 0 % | 8 % | Non-Coding |
126 | NC_015359 | AATA | 3 | 120254 | 120264 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
127 | NC_015359 | ATTTT | 3 | 120321 | 120334 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
128 | NC_015359 | TTC | 4 | 120694 | 120705 | 12 | 0 % | 66.67 % | 0 % | 33.33 % | 8 % | Non-Coding |
129 | NC_015359 | AAAAT | 3 | 122211 | 122224 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | Non-Coding |
130 | NC_015359 | T | 12 | 122362 | 122373 | 12 | 0 % | 100 % | 0 % | 0 % | 0 % | Non-Coding |