Tetra-nucleotide Imperfect Repeats of Hevea brasiliensis chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_015308 | AAGT | 3 | 1490 | 1500 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 32690937 |
| 2 | NC_015308 | ATTC | 3 | 5948 | 5958 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 32690937 |
| 3 | NC_015308 | TTTA | 3 | 6150 | 6160 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 32690937 |
| 4 | NC_015308 | AAGA | 3 | 6957 | 6968 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 5 | NC_015308 | TAAA | 6 | 9744 | 9766 | 23 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 6 | NC_015308 | TAAA | 3 | 9785 | 9797 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 7 | NC_015308 | GAAA | 3 | 9948 | 9959 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_015308 | TTGA | 3 | 13578 | 13589 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 9 | NC_015308 | TTTC | 3 | 15727 | 15739 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 32690938 |
| 10 | NC_015308 | TAAA | 3 | 16044 | 16054 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 32690938 |
| 11 | NC_015308 | TGAA | 3 | 19379 | 19390 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 32690938 |
| 12 | NC_015308 | AGAA | 6 | 25646 | 25667 | 22 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 13 | NC_015308 | TTTC | 3 | 25763 | 25773 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 14 | NC_015308 | TTTC | 3 | 26731 | 26742 | 12 | 0 % | 75 % | 0 % | 25 % | 0 % | Non-Coding |
| 15 | NC_015308 | TTTA | 3 | 27818 | 27829 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 16 | NC_015308 | ATTT | 3 | 28669 | 28680 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 17 | NC_015308 | TATT | 3 | 28969 | 28980 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 18 | NC_015308 | AAAT | 3 | 29439 | 29451 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 19 | NC_015308 | ATAA | 3 | 29452 | 29463 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 20 | NC_015308 | TAAA | 3 | 31759 | 31769 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 21 | NC_015308 | ATTT | 3 | 31920 | 31931 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 22 | NC_015308 | AATT | 3 | 31994 | 32004 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 23 | NC_015308 | ATGA | 3 | 34881 | 34891 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 24 | NC_015308 | CAAT | 3 | 34937 | 34949 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 25 | NC_015308 | CTTT | 3 | 35562 | 35573 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 26 | NC_015308 | GAAA | 3 | 37605 | 37616 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 32690938 |
| 27 | NC_015308 | TTGC | 3 | 38006 | 38016 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 32690938 |
| 28 | NC_015308 | TCTA | 3 | 39012 | 39023 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 29 | NC_015308 | AAAT | 3 | 39099 | 39109 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 30 | NC_015308 | TAAT | 6 | 40108 | 40132 | 25 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 31 | NC_015308 | ATTG | 3 | 42063 | 42073 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | 32690939 |
| 32 | NC_015308 | TGAA | 3 | 43707 | 43718 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 32690939 |
| 33 | NC_015308 | GTAA | 3 | 47863 | 47873 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 32690939 |
| 34 | NC_015308 | ATCT | 3 | 49411 | 49421 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 35 | NC_015308 | AAAT | 3 | 50091 | 50102 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 36 | NC_015308 | ATTT | 3 | 54388 | 54399 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 37 | NC_015308 | AGAA | 3 | 54621 | 54633 | 13 | 75 % | 0 % | 25 % | 0 % | 7 % | Non-Coding |
| 38 | NC_015308 | AATC | 3 | 54911 | 54921 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 39 | NC_015308 | AAAT | 3 | 57558 | 57568 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 40 | NC_015308 | TTTC | 3 | 57936 | 57946 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 41 | NC_015308 | TGAT | 3 | 58161 | 58172 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 42 | NC_015308 | AGTT | 4 | 62531 | 62546 | 16 | 25 % | 50 % | 25 % | 0 % | 6 % | Non-Coding |
| 43 | NC_015308 | TATT | 6 | 69518 | 69542 | 25 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 44 | NC_015308 | TTCT | 3 | 69696 | 69706 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 45 | NC_015308 | TACA | 3 | 71967 | 71978 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 32690941 |
| 46 | NC_015308 | TTTC | 3 | 73397 | 73409 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 47 | NC_015308 | TTAG | 3 | 73843 | 73854 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 48 | NC_015308 | TTTC | 3 | 80077 | 80087 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 32690945 |
| 49 | NC_015308 | TTTA | 3 | 81351 | 81362 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 32690945 |
| 50 | NC_015308 | TTAC | 3 | 81401 | 81412 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 32690945 |
| 51 | NC_015308 | TTTA | 3 | 84674 | 84684 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 32690945 |
| 52 | NC_015308 | ATTT | 3 | 86790 | 86801 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 32690945 |
| 53 | NC_015308 | ATTT | 3 | 87644 | 87654 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 32690945 |
| 54 | NC_015308 | CAAT | 3 | 87881 | 87891 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 32690945 |
| 55 | NC_015308 | TTCT | 3 | 92973 | 92983 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 32690945 |
| 56 | NC_015308 | CTTT | 3 | 94172 | 94182 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 32690945 |
| 57 | NC_015308 | TGAT | 3 | 96003 | 96015 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 32690945 |
| 58 | NC_015308 | TGAT | 3 | 96045 | 96057 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 32690945 |
| 59 | NC_015308 | AATA | 3 | 96949 | 96961 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 32690945 |
| 60 | NC_015308 | AATA | 3 | 98798 | 98809 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 32690945 |
| 61 | NC_015308 | ATCC | 3 | 108265 | 108276 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 32690944 |
| 62 | NC_015308 | TCTA | 3 | 108623 | 108634 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 32690944 |
| 63 | NC_015308 | AAGG | 3 | 108762 | 108772 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 32690944 |
| 64 | NC_015308 | TCAA | 3 | 109499 | 109509 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 32690944 |
| 65 | NC_015308 | GAGG | 3 | 111490 | 111501 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 32690944 |
| 66 | NC_015308 | AGGT | 3 | 111702 | 111713 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 32690944 |
| 67 | NC_015308 | TAAG | 3 | 112822 | 112832 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 32690944 |
| 68 | NC_015308 | AAAT | 3 | 117605 | 117615 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 32690944 |
| 69 | NC_015308 | AAAT | 3 | 118728 | 118739 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 32690944 |
| 70 | NC_015308 | CATA | 3 | 119072 | 119083 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 32690944 |
| 71 | NC_015308 | TAAA | 3 | 119534 | 119545 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 32690944 |
| 72 | NC_015308 | CCAT | 3 | 119787 | 119798 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | 32690944 |
| 73 | NC_015308 | AAAT | 3 | 121270 | 121280 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 32690944 |
| 74 | NC_015308 | AACT | 3 | 121678 | 121689 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 32690944 |
| 75 | NC_015308 | ACTT | 3 | 123091 | 123102 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 32690944 |
| 76 | NC_015308 | TGAA | 3 | 123784 | 123795 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 32690944 |
| 77 | NC_015308 | TTAA | 3 | 124983 | 124995 | 13 | 50 % | 50 % | 0 % | 0 % | 7 % | 32690944 |
| 78 | NC_015308 | ATCA | 4 | 125157 | 125173 | 17 | 50 % | 25 % | 0 % | 25 % | 5 % | 32690944 |
| 79 | NC_015308 | TTCT | 3 | 126913 | 126923 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 32690944 |
| 80 | NC_015308 | AATC | 3 | 127277 | 127288 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 32690944 |
| 81 | NC_015308 | TGGG | 3 | 129210 | 129220 | 11 | 0 % | 25 % | 75 % | 0 % | 9 % | 32690944 |
| 82 | NC_015308 | TTAA | 6 | 129659 | 129680 | 22 | 50 % | 50 % | 0 % | 0 % | 9 % | 32690944 |
| 83 | NC_015308 | ATTT | 3 | 131193 | 131203 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 32690944 |
| 84 | NC_015308 | TTTA | 3 | 131562 | 131572 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 32690944 |
| 85 | NC_015308 | CATT | 3 | 131893 | 131904 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 32690944 |
| 86 | NC_015308 | TTCA | 3 | 131976 | 131986 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 32690944 |
| 87 | NC_015308 | TTTC | 3 | 132817 | 132827 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 32690944 |
| 88 | NC_015308 | TTTC | 3 | 133404 | 133415 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 32690944 |
| 89 | NC_015308 | CTTA | 3 | 137569 | 137579 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 32690944 |
| 90 | NC_015308 | CCTT | 3 | 141629 | 141639 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 32690944 |
| 91 | NC_015308 | GGAT | 3 | 142125 | 142136 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 32690944 |
| 92 | NC_015308 | TATT | 3 | 145077 | 145089 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | 32690944 |
| 93 | NC_015308 | ATCA | 3 | 154386 | 154398 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 32690943 |
| 94 | NC_015308 | TGAT | 3 | 154481 | 154493 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 32690943 |
| 95 | NC_015308 | GAAA | 3 | 154804 | 154815 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 32690943 |
| 96 | NC_015308 | AAAG | 3 | 156219 | 156229 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 32690943 |
| 97 | NC_015308 | TATT | 3 | 157290 | 157301 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 32690943 |