Penta-nucleotide Imperfect Repeats of Fragaria vesca subsp. vesca chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_015206 | ATTGA | 3 | 3139 | 3152 | 14 | 40 % | 40 % | 20 % | 0 % | 7 % | 32512684 |
2 | NC_015206 | CTCTT | 4 | 4514 | 4532 | 19 | 0 % | 60 % | 0 % | 40 % | 10 % | Non-Coding |
3 | NC_015206 | ATTTT | 3 | 5424 | 5438 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | 32512684 |
4 | NC_015206 | GATAA | 3 | 7930 | 7944 | 15 | 60 % | 20 % | 20 % | 0 % | 6 % | Non-Coding |
5 | NC_015206 | GAATA | 3 | 17378 | 17391 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | 32512685 |
6 | NC_015206 | AGAAA | 3 | 25701 | 25715 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | 32512685 |
7 | NC_015206 | CCAAC | 4 | 27373 | 27392 | 20 | 40 % | 0 % | 0 % | 60 % | 5 % | Non-Coding |
8 | NC_015206 | ATTCA | 3 | 27842 | 27855 | 14 | 40 % | 40 % | 0 % | 20 % | 7 % | Non-Coding |
9 | NC_015206 | TGATA | 4 | 32979 | 32997 | 19 | 40 % | 40 % | 20 % | 0 % | 10 % | Non-Coding |
10 | NC_015206 | ATTCA | 3 | 52956 | 52970 | 15 | 40 % | 40 % | 0 % | 20 % | 6 % | Non-Coding |
11 | NC_015206 | AATAA | 4 | 60092 | 60111 | 20 | 80 % | 20 % | 0 % | 0 % | 10 % | Non-Coding |
12 | NC_015206 | AATAA | 3 | 60501 | 60515 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
13 | NC_015206 | TATAT | 9 | 67916 | 67958 | 43 | 40 % | 60 % | 0 % | 0 % | 9 % | Non-Coding |
14 | NC_015206 | TTTAT | 4 | 83174 | 83194 | 21 | 20 % | 80 % | 0 % | 0 % | 9 % | 32512688 |
15 | NC_015206 | ATATG | 3 | 87526 | 87540 | 15 | 40 % | 40 % | 20 % | 0 % | 6 % | 32512688 |
16 | NC_015206 | TCCGA | 3 | 91138 | 91152 | 15 | 20 % | 20 % | 20 % | 40 % | 6 % | 32512688 |
17 | NC_015206 | GAGGT | 3 | 95803 | 95817 | 15 | 20 % | 20 % | 60 % | 0 % | 0 % | 32512688 |
18 | NC_015206 | TCCGG | 3 | 95988 | 96002 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | 32512688 |
19 | NC_015206 | CTTTT | 3 | 128371 | 128385 | 15 | 0 % | 80 % | 0 % | 20 % | 6 % | 32512692 |
20 | NC_015206 | ACCGG | 3 | 145295 | 145309 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |
21 | NC_015206 | TCACC | 3 | 145479 | 145493 | 15 | 20 % | 20 % | 0 % | 60 % | 0 % | Non-Coding |
22 | NC_015206 | CATAC | 3 | 146474 | 146487 | 14 | 40 % | 20 % | 0 % | 40 % | 7 % | Non-Coding |