Tetra-nucleotide Imperfect Repeats of Gossypium thurberi chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_015204 | AAGT | 3 | 1144 | 1154 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 32521091 |
| 2 | NC_015204 | AAAT | 3 | 2068 | 2079 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 3 | NC_015204 | ATCT | 3 | 4719 | 4730 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 4 | NC_015204 | TTCA | 3 | 4990 | 5001 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 5 | NC_015204 | AAAT | 4 | 6511 | 6526 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | Non-Coding |
| 6 | NC_015204 | TTTA | 3 | 6596 | 6607 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 7 | NC_015204 | ATAG | 3 | 8400 | 8411 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | Non-Coding |
| 8 | NC_015204 | ATTT | 3 | 8670 | 8681 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 9 | NC_015204 | AATC | 3 | 8758 | 8768 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 10 | NC_015204 | ATTT | 4 | 8861 | 8875 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 11 | NC_015204 | TCTA | 3 | 13509 | 13520 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 12 | NC_015204 | AAAT | 3 | 14131 | 14142 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 13 | NC_015204 | TTTA | 4 | 14760 | 14774 | 15 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 14 | NC_015204 | TTTA | 3 | 23438 | 23449 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 32521092 |
| 15 | NC_015204 | GATA | 3 | 27272 | 27282 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 32521092 |
| 16 | NC_015204 | CTAA | 3 | 29112 | 29123 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 17 | NC_015204 | GAAA | 3 | 31455 | 31466 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 18 | NC_015204 | ATCA | 3 | 31655 | 31665 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 19 | NC_015204 | TTCA | 4 | 32523 | 32538 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 20 | NC_015204 | AATA | 3 | 33570 | 33581 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 21 | NC_015204 | TCTT | 3 | 33643 | 33655 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | Non-Coding |
| 22 | NC_015204 | GTTT | 3 | 33981 | 33992 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 23 | NC_015204 | GAAA | 3 | 35969 | 35980 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 32521092 |
| 24 | NC_015204 | TTGC | 3 | 36370 | 36380 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | 32521092 |
| 25 | NC_015204 | ATCT | 3 | 37389 | 37400 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 26 | NC_015204 | AAAT | 3 | 37453 | 37464 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_015204 | TGAA | 4 | 38003 | 38017 | 15 | 50 % | 25 % | 25 % | 0 % | 6 % | Non-Coding |
| 28 | NC_015204 | TAAT | 3 | 38400 | 38411 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 29 | NC_015204 | AAAT | 3 | 38430 | 38442 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 30 | NC_015204 | GATC | 3 | 39027 | 39037 | 11 | 25 % | 25 % | 25 % | 25 % | 9 % | Non-Coding |
| 31 | NC_015204 | AATG | 3 | 42374 | 42385 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 32521093 |
| 32 | NC_015204 | ATCT | 4 | 44098 | 44113 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 33 | NC_015204 | GTAA | 3 | 46868 | 46878 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 32521093 |
| 34 | NC_015204 | TTTG | 3 | 48382 | 48393 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 35 | NC_015204 | AAAG | 3 | 49734 | 49745 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 36 | NC_015204 | CATA | 3 | 51098 | 51108 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 37 | NC_015204 | ACAT | 3 | 51392 | 51402 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 38 | NC_015204 | CAAA | 3 | 52531 | 52542 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | 32521093 |
| 39 | NC_015204 | GTCT | 3 | 53141 | 53152 | 12 | 0 % | 50 % | 25 % | 25 % | 8 % | 32521093 |
| 40 | NC_015204 | GTTT | 3 | 53906 | 53918 | 13 | 0 % | 75 % | 25 % | 0 % | 7 % | Non-Coding |
| 41 | NC_015204 | GATT | 3 | 53944 | 53955 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 42 | NC_015204 | ATTT | 3 | 54256 | 54266 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 43 | NC_015204 | AATC | 5 | 54284 | 54302 | 19 | 50 % | 25 % | 0 % | 25 % | 10 % | Non-Coding |
| 44 | NC_015204 | AGAA | 3 | 54836 | 54847 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 45 | NC_015204 | AAAG | 3 | 60640 | 60650 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 46 | NC_015204 | ATTT | 3 | 62367 | 62378 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 47 | NC_015204 | TAGT | 3 | 62391 | 62402 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | Non-Coding |
| 48 | NC_015204 | TTTA | 3 | 62892 | 62904 | 13 | 25 % | 75 % | 0 % | 0 % | 7 % | Non-Coding |
| 49 | NC_015204 | TCTA | 3 | 63431 | 63442 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 50 | NC_015204 | TTTC | 3 | 67253 | 67263 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 51 | NC_015204 | TAAA | 3 | 71865 | 71876 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 32521095 |
| 52 | NC_015204 | TCAT | 3 | 73404 | 73415 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 53 | NC_015204 | GAAC | 3 | 73747 | 73758 | 12 | 50 % | 0 % | 25 % | 25 % | 8 % | Non-Coding |
| 54 | NC_015204 | TTTA | 3 | 74679 | 74690 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 32521095 |
| 55 | NC_015204 | TGAA | 3 | 76497 | 76507 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 32521095 |
| 56 | NC_015204 | TTGA | 3 | 81540 | 81552 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 32521095 |
| 57 | NC_015204 | TTTC | 3 | 82475 | 82485 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 32521095 |
| 58 | NC_015204 | CTTT | 3 | 84413 | 84423 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 32521095 |
| 59 | NC_015204 | TTAA | 3 | 86538 | 86549 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 32521095 |
| 60 | NC_015204 | TTTC | 3 | 86791 | 86802 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 32521095 |
| 61 | NC_015204 | AATT | 3 | 87637 | 87647 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 32521095 |
| 62 | NC_015204 | TTAT | 3 | 87774 | 87785 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 32521095 |
| 63 | NC_015204 | AATT | 3 | 88416 | 88427 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 32521095 |
| 64 | NC_015204 | TTCT | 3 | 92424 | 92434 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 32521095 |
| 65 | NC_015204 | ATCG | 3 | 93182 | 93194 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 32521095 |
| 66 | NC_015204 | CTTT | 3 | 93611 | 93621 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 32521095 |
| 67 | NC_015204 | TGAT | 3 | 95493 | 95505 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 32521095 |
| 68 | NC_015204 | AATA | 3 | 96376 | 96388 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 32521095 |
| 69 | NC_015204 | TCTA | 3 | 108098 | 108109 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 32521095 |
| 70 | NC_015204 | AAGG | 3 | 108247 | 108257 | 11 | 50 % | 0 % | 50 % | 0 % | 9 % | 32521095 |
| 71 | NC_015204 | GAGG | 3 | 110988 | 110999 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | 32521095 |
| 72 | NC_015204 | AGGT | 3 | 111200 | 111211 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 32521095 |
| 73 | NC_015204 | TAAG | 3 | 112320 | 112330 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 32521095 |
| 74 | NC_015204 | AAAT | 3 | 116051 | 116061 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 32521095 |
| 75 | NC_015204 | AATA | 3 | 117685 | 117697 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 32521095 |
| 76 | NC_015204 | TTGT | 3 | 117762 | 117773 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | 32521095 |
| 77 | NC_015204 | AATA | 3 | 117880 | 117891 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 32521095 |
| 78 | NC_015204 | TTCA | 4 | 118829 | 118844 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | 32521095 |
| 79 | NC_015204 | TAAA | 3 | 119077 | 119092 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 32521095 |
| 80 | NC_015204 | TAGA | 3 | 120812 | 120823 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 32521095 |
| 81 | NC_015204 | TTGA | 3 | 122856 | 122867 | 12 | 25 % | 50 % | 25 % | 0 % | 0 % | 32521095 |
| 82 | NC_015204 | TTTG | 3 | 124099 | 124109 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | 32521095 |
| 83 | NC_015204 | TTCT | 3 | 124913 | 124924 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 32521095 |
| 84 | NC_015204 | TAAT | 3 | 130721 | 130732 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | 32521095 |
| 85 | NC_015204 | CATT | 3 | 130883 | 130894 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 32521095 |
| 86 | NC_015204 | AACT | 3 | 131043 | 131053 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 32521095 |
| 87 | NC_015204 | ATTT | 3 | 131859 | 131870 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 32521095 |
| 88 | NC_015204 | AAAG | 3 | 132491 | 132502 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | 32521095 |
| 89 | NC_015204 | ATTG | 3 | 132887 | 132898 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | 32521095 |
| 90 | NC_015204 | CTTA | 3 | 136672 | 136682 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 32521095 |
| 91 | NC_015204 | CCTT | 3 | 140745 | 140755 | 11 | 0 % | 50 % | 0 % | 50 % | 9 % | 32521095 |
| 92 | NC_015204 | GGAT | 3 | 141289 | 141300 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | 32521095 |
| 93 | NC_015204 | AATA | 4 | 145234 | 145249 | 16 | 75 % | 25 % | 0 % | 0 % | 6 % | 32521095 |
| 94 | NC_015204 | TTTC | 3 | 149862 | 149873 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 95 | NC_015204 | ATCA | 3 | 153539 | 153551 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | 32521099 |
| 96 | NC_015204 | TGAT | 3 | 153634 | 153646 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 32521099 |
| 97 | NC_015204 | AAAG | 3 | 155381 | 155391 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 32521099 |
| 98 | NC_015204 | CGAT | 3 | 155808 | 155820 | 13 | 25 % | 25 % | 25 % | 25 % | 7 % | 32521099 |
| 99 | NC_015204 | TATT | 3 | 156440 | 156451 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 32521099 |