Penta-nucleotide Imperfect Repeats of Brassica rapa subsp. pekinensis chloroplast
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S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NC_015139 | AAAAT | 3 | 4099 | 4112 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | Non-Coding |
2 | NC_015139 | GAAAA | 3 | 4461 | 4475 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
3 | NC_015139 | TCTCT | 3 | 5101 | 5114 | 14 | 0 % | 60 % | 0 % | 40 % | 7 % | Non-Coding |
4 | NC_015139 | TACCT | 3 | 6324 | 6337 | 14 | 20 % | 40 % | 0 % | 40 % | 7 % | Non-Coding |
5 | NC_015139 | TAAGA | 3 | 25327 | 25340 | 14 | 60 % | 20 % | 20 % | 0 % | 7 % | Non-Coding |
6 | NC_015139 | GAAAA | 4 | 41476 | 41495 | 20 | 80 % | 0 % | 20 % | 0 % | 10 % | Non-Coding |
7 | NC_015139 | TTTTA | 3 | 62120 | 62133 | 14 | 20 % | 80 % | 0 % | 0 % | 7 % | Non-Coding |
8 | NC_015139 | TTTTA | 4 | 63790 | 63809 | 20 | 20 % | 80 % | 0 % | 0 % | 5 % | Non-Coding |
9 | NC_015139 | GAAAA | 3 | 64920 | 64934 | 15 | 80 % | 0 % | 20 % | 0 % | 6 % | Non-Coding |
10 | NC_015139 | ATTTA | 3 | 70748 | 70763 | 16 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
11 | NC_015139 | TCCGG | 3 | 93866 | 93880 | 15 | 0 % | 20 % | 40 % | 40 % | 6 % | Non-Coding |
12 | NC_015139 | TTTCG | 3 | 96445 | 96458 | 14 | 0 % | 60 % | 20 % | 20 % | 7 % | Non-Coding |
13 | NC_015139 | TCTAA | 3 | 112243 | 112257 | 15 | 40 % | 40 % | 0 % | 20 % | 6 % | Non-Coding |
14 | NC_015139 | TTTAA | 3 | 112918 | 112932 | 15 | 40 % | 60 % | 0 % | 0 % | 6 % | Non-Coding |
15 | NC_015139 | AAAAT | 3 | 113829 | 113842 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | Non-Coding |
16 | NC_015139 | AAATA | 3 | 114564 | 114577 | 14 | 80 % | 20 % | 0 % | 0 % | 7 % | Non-Coding |
17 | NC_015139 | AATAA | 3 | 116348 | 116362 | 15 | 80 % | 20 % | 0 % | 0 % | 6 % | Non-Coding |
18 | NC_015139 | TGTTA | 3 | 120072 | 120086 | 15 | 20 % | 60 % | 20 % | 0 % | 6 % | Non-Coding |
19 | NC_015139 | TATTT | 3 | 124903 | 124917 | 15 | 20 % | 80 % | 0 % | 0 % | 6 % | Non-Coding |
20 | NC_015139 | ACCGG | 3 | 142883 | 142897 | 15 | 20 % | 0 % | 40 % | 40 % | 6 % | Non-Coding |