Tetra-nucleotide Imperfect Repeats of Brassica rapa subsp. pekinensis chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_015139 | TACC | 3 | 544 | 554 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | Non-Coding |
| 2 | NC_015139 | GTTT | 3 | 1807 | 1818 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 3 | NC_015139 | TTTA | 3 | 3720 | 3731 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 4 | NC_015139 | TTCA | 3 | 4925 | 4936 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 5 | NC_015139 | ATTC | 3 | 5470 | 5480 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 6 | NC_015139 | TTCT | 3 | 6777 | 6788 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 7 | NC_015139 | TTTA | 4 | 6852 | 6867 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 8 | NC_015139 | TTCT | 3 | 7467 | 7478 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 9 | NC_015139 | GTTT | 3 | 9727 | 9738 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 10 | NC_015139 | TTTC | 3 | 11902 | 11913 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 11 | NC_015139 | TTTG | 3 | 12534 | 12545 | 12 | 0 % | 75 % | 25 % | 0 % | 8 % | Non-Coding |
| 12 | NC_015139 | AAAT | 3 | 13217 | 13228 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 13 | NC_015139 | TTTA | 3 | 14475 | 14486 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 14 | NC_015139 | TTCA | 3 | 21685 | 21696 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 15 | NC_015139 | AAAT | 3 | 26879 | 26889 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 16 | NC_015139 | CAAA | 3 | 28093 | 28104 | 12 | 75 % | 0 % | 0 % | 25 % | 0 % | Non-Coding |
| 17 | NC_015139 | TTTA | 3 | 28499 | 28509 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 18 | NC_015139 | AGAA | 3 | 29822 | 29833 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 19 | NC_015139 | ATTT | 3 | 30270 | 30281 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 20 | NC_015139 | TTCT | 3 | 32354 | 32365 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 21 | NC_015139 | GAAA | 3 | 33351 | 33362 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 22 | NC_015139 | TCTT | 4 | 34367 | 34381 | 15 | 0 % | 75 % | 0 % | 25 % | 6 % | Non-Coding |
| 23 | NC_015139 | CTGG | 3 | 34402 | 34414 | 13 | 0 % | 25 % | 50 % | 25 % | 7 % | Non-Coding |
| 24 | NC_015139 | TTAT | 3 | 34530 | 34540 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 25 | NC_015139 | AAAC | 3 | 35906 | 35917 | 12 | 75 % | 0 % | 0 % | 25 % | 8 % | Non-Coding |
| 26 | NC_015139 | ATAA | 3 | 36502 | 36513 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | Non-Coding |
| 27 | NC_015139 | TTAA | 5 | 42119 | 42138 | 20 | 50 % | 50 % | 0 % | 0 % | 10 % | Non-Coding |
| 28 | NC_015139 | AAAT | 3 | 43001 | 43011 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | Non-Coding |
| 29 | NC_015139 | GTAA | 3 | 43645 | 43655 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 30 | NC_015139 | TAAA | 3 | 45583 | 45594 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | Non-Coding |
| 31 | NC_015139 | TTAA | 3 | 45603 | 45614 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 32 | NC_015139 | ATCT | 4 | 47327 | 47342 | 16 | 25 % | 50 % | 0 % | 25 % | 6 % | Non-Coding |
| 33 | NC_015139 | GATT | 3 | 49583 | 49594 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 34 | NC_015139 | AGAA | 3 | 50001 | 50012 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 35 | NC_015139 | AATT | 3 | 55744 | 55755 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 36 | NC_015139 | TTTC | 3 | 60436 | 60446 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 37 | NC_015139 | CAGC | 3 | 62980 | 62991 | 12 | 25 % | 0 % | 25 % | 50 % | 8 % | Non-Coding |
| 38 | NC_015139 | AAAG | 3 | 65836 | 65846 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 39 | NC_015139 | TTGA | 3 | 70223 | 70234 | 12 | 25 % | 50 % | 25 % | 0 % | 8 % | Non-Coding |
| 40 | NC_015139 | TGTC | 3 | 70459 | 70469 | 11 | 0 % | 50 % | 25 % | 25 % | 9 % | Non-Coding |
| 41 | NC_015139 | AGAA | 3 | 72496 | 72507 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 42 | NC_015139 | CTTT | 3 | 72995 | 73005 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 43 | NC_015139 | TTCA | 3 | 79012 | 79023 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | Non-Coding |
| 44 | NC_015139 | TAGT | 3 | 81674 | 81684 | 11 | 25 % | 50 % | 25 % | 0 % | 9 % | Non-Coding |
| 45 | NC_015139 | CAAT | 3 | 81999 | 82009 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 46 | NC_015139 | AATT | 3 | 82331 | 82341 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | Non-Coding |
| 47 | NC_015139 | TTCT | 3 | 87077 | 87087 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 48 | NC_015139 | ATTT | 4 | 87359 | 87374 | 16 | 25 % | 75 % | 0 % | 0 % | 6 % | Non-Coding |
| 49 | NC_015139 | CTTT | 3 | 88276 | 88286 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 50 | NC_015139 | TGAT | 3 | 90143 | 90155 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 51 | NC_015139 | AATA | 3 | 90990 | 91002 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | Non-Coding |
| 52 | NC_015139 | ATCC | 3 | 102100 | 102111 | 12 | 25 % | 25 % | 0 % | 50 % | 8 % | Non-Coding |
| 53 | NC_015139 | GAGG | 3 | 105209 | 105220 | 12 | 25 % | 0 % | 75 % | 0 % | 8 % | Non-Coding |
| 54 | NC_015139 | AGGT | 3 | 105421 | 105432 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 55 | NC_015139 | TAAG | 3 | 106541 | 106551 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | Non-Coding |
| 56 | NC_015139 | GAAA | 3 | 109438 | 109449 | 12 | 75 % | 0 % | 25 % | 0 % | 8 % | Non-Coding |
| 57 | NC_015139 | ATAG | 3 | 111520 | 111531 | 12 | 50 % | 25 % | 25 % | 0 % | 0 % | Non-Coding |
| 58 | NC_015139 | ATTT | 3 | 111731 | 111741 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | Non-Coding |
| 59 | NC_015139 | TATT | 3 | 113515 | 113526 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |
| 60 | NC_015139 | AAAT | 5 | 116295 | 116314 | 20 | 75 % | 25 % | 0 % | 0 % | 10 % | Non-Coding |
| 61 | NC_015139 | TCTT | 3 | 118858 | 118869 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | Non-Coding |
| 62 | NC_015139 | AATT | 3 | 122349 | 122360 | 12 | 50 % | 50 % | 0 % | 0 % | 8 % | Non-Coding |
| 63 | NC_015139 | CTTT | 3 | 122595 | 122605 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 64 | NC_015139 | TCAA | 3 | 123450 | 123460 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | Non-Coding |
| 65 | NC_015139 | CTTT | 3 | 123904 | 123914 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | Non-Coding |
| 66 | NC_015139 | TTTG | 3 | 124459 | 124469 | 11 | 0 % | 75 % | 25 % | 0 % | 9 % | Non-Coding |
| 67 | NC_015139 | TATC | 3 | 126154 | 126166 | 13 | 25 % | 50 % | 0 % | 25 % | 7 % | Non-Coding |
| 68 | NC_015139 | CTTA | 3 | 130213 | 130223 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | Non-Coding |
| 69 | NC_015139 | GGAT | 3 | 134653 | 134664 | 12 | 25 % | 25 % | 50 % | 0 % | 8 % | Non-Coding |
| 70 | NC_015139 | CATA | 3 | 139555 | 139566 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | Non-Coding |
| 71 | NC_015139 | ATCA | 3 | 146651 | 146663 | 13 | 50 % | 25 % | 0 % | 25 % | 7 % | Non-Coding |
| 72 | NC_015139 | TGAT | 3 | 146746 | 146758 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | Non-Coding |
| 73 | NC_015139 | AAAG | 3 | 148478 | 148488 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | Non-Coding |
| 74 | NC_015139 | TATT | 3 | 149549 | 149560 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | Non-Coding |