Tetra-nucleotide Imperfect Repeats of Rhizanthella gardneri plastid
Click on Table Heading To Sort Results Accordingly
| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_014874 | CATA | 3 | 929 | 940 | 12 | 50 % | 25 % | 0 % | 25 % | 8 % | 31713411 |
| 2 | NC_014874 | CTTT | 4 | 1651 | 1666 | 16 | 0 % | 75 % | 0 % | 25 % | 6 % | 31713411 |
| 3 | NC_014874 | TAAT | 3 | 5260 | 5271 | 12 | 50 % | 50 % | 0 % | 0 % | 0 % | 31713411 |
| 4 | NC_014874 | ATAG | 3 | 5964 | 5975 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 31713411 |
| 5 | NC_014874 | AATA | 3 | 6200 | 6210 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 31713411 |
| 6 | NC_014874 | AATA | 4 | 8028 | 8042 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | 31713411 |
| 7 | NC_014874 | AAAT | 3 | 8146 | 8157 | 12 | 75 % | 25 % | 0 % | 0 % | 0 % | 31713411 |
| 8 | NC_014874 | AATT | 3 | 8531 | 8541 | 11 | 50 % | 50 % | 0 % | 0 % | 9 % | 31713411 |
| 9 | NC_014874 | AAAT | 3 | 9571 | 9582 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 31713411 |
| 10 | NC_014874 | ATCT | 3 | 14889 | 14900 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 31713411 |
| 11 | NC_014874 | GAAA | 3 | 15891 | 15901 | 11 | 75 % | 0 % | 25 % | 0 % | 9 % | 31713411 |
| 12 | NC_014874 | TTTA | 3 | 16577 | 16588 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 31713411 |
| 13 | NC_014874 | TAAA | 3 | 16848 | 16858 | 11 | 75 % | 25 % | 0 % | 0 % | 9 % | 31713411 |
| 14 | NC_014874 | CATA | 3 | 17066 | 17076 | 11 | 50 % | 25 % | 0 % | 25 % | 9 % | 31713411 |
| 15 | NC_014874 | AATA | 6 | 18656 | 18678 | 23 | 75 % | 25 % | 0 % | 0 % | 4 % | 31713411 |
| 16 | NC_014874 | AGAT | 3 | 19043 | 19053 | 11 | 50 % | 25 % | 25 % | 0 % | 9 % | 31713411 |
| 17 | NC_014874 | TTTA | 3 | 19999 | 20010 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 31713411 |
| 18 | NC_014874 | TATT | 3 | 20311 | 20321 | 11 | 25 % | 75 % | 0 % | 0 % | 9 % | 31713411 |
| 19 | NC_014874 | TTTC | 3 | 20744 | 20755 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 31713411 |
| 20 | NC_014874 | ATAA | 3 | 21524 | 21535 | 12 | 75 % | 25 % | 0 % | 0 % | 8 % | 31713411 |
| 21 | NC_014874 | TCTT | 3 | 26623 | 26633 | 11 | 0 % | 75 % | 0 % | 25 % | 9 % | 31713411 |
| 22 | NC_014874 | TCTT | 3 | 29767 | 29779 | 13 | 0 % | 75 % | 0 % | 25 % | 7 % | 31713411 |
| 23 | NC_014874 | AATA | 3 | 33302 | 33314 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 31713411 |
| 24 | NC_014874 | TTTC | 3 | 33364 | 33375 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 31713411 |
| 25 | NC_014874 | TTTA | 3 | 36101 | 36112 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 31713411 |
| 26 | NC_014874 | CATT | 3 | 37301 | 37312 | 12 | 25 % | 50 % | 0 % | 25 % | 0 % | 31713411 |
| 27 | NC_014874 | CTTT | 3 | 39844 | 39855 | 12 | 0 % | 75 % | 0 % | 25 % | 8 % | 31713411 |
| 28 | NC_014874 | ATAA | 4 | 40577 | 40591 | 15 | 75 % | 25 % | 0 % | 0 % | 6 % | 31713411 |
| 29 | NC_014874 | ATTT | 3 | 40764 | 40775 | 12 | 25 % | 75 % | 0 % | 0 % | 8 % | 31713411 |
| 30 | NC_014874 | TAAA | 3 | 41313 | 41325 | 13 | 75 % | 25 % | 0 % | 0 % | 7 % | 31713411 |
| 31 | NC_014874 | CTTA | 3 | 41857 | 41867 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 31713411 |
| 32 | NC_014874 | TTCA | 3 | 49419 | 49430 | 12 | 25 % | 50 % | 0 % | 25 % | 8 % | 31713411 |
| 33 | NC_014874 | ATCT | 3 | 49544 | 49554 | 11 | 25 % | 50 % | 0 % | 25 % | 9 % | 31713411 |
| 34 | NC_014874 | TGAA | 3 | 52175 | 52186 | 12 | 50 % | 25 % | 25 % | 0 % | 8 % | 31713411 |
| 35 | NC_014874 | TGAT | 3 | 53158 | 53170 | 13 | 25 % | 50 % | 25 % | 0 % | 7 % | 31713411 |
| 36 | NC_014874 | GAAA | 3 | 55390 | 55401 | 12 | 75 % | 0 % | 25 % | 0 % | 0 % | 31713411 |
| 37 | NC_014874 | CCAT | 3 | 57092 | 57102 | 11 | 25 % | 25 % | 0 % | 50 % | 9 % | 31713411 |