Hexa-nucleotide Imperfect Repeats of Theobroma cacao chloroplast
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| S.No. | Genome ID | Motif | Iterations | Start | End | Tract Length | A% | T% | G% | C% | Imperfection % | Protein ID |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NC_014676 | TATTTT | 3 | 5002 | 5020 | 19 | 16.67 % | 83.33 % | 0 % | 0 % | 10 % | Non-Coding |
| 2 | NC_014676 | TAATAG | 3 | 44945 | 44963 | 19 | 50 % | 33.33 % | 16.67 % | 0 % | 5 % | Non-Coding |
| 3 | NC_014676 | AATAAA | 3 | 47259 | 47277 | 19 | 83.33 % | 16.67 % | 0 % | 0 % | 10 % | Non-Coding |
| 4 | NC_014676 | AATTTT | 3 | 50071 | 50088 | 18 | 33.33 % | 66.67 % | 0 % | 0 % | 5 % | Non-Coding |
| 5 | NC_014676 | TTTATT | 3 | 52275 | 52293 | 19 | 16.67 % | 83.33 % | 0 % | 0 % | 5 % | Non-Coding |
| 6 | NC_014676 | ATTTCG | 3 | 54346 | 54362 | 17 | 16.67 % | 50 % | 16.67 % | 16.67 % | 5 % | Non-Coding |
| 7 | NC_014676 | TATTTG | 3 | 55268 | 55285 | 18 | 16.67 % | 66.67 % | 16.67 % | 0 % | 5 % | Non-Coding |
| 8 | NC_014676 | GAAGGA | 3 | 97784 | 97801 | 18 | 50 % | 0 % | 50 % | 0 % | 5 % | 31319968 |
| 9 | NC_014676 | TTTGTT | 3 | 102955 | 102973 | 19 | 0 % | 83.33 % | 16.67 % | 0 % | 10 % | 31319968 |
| 10 | NC_014676 | TATTAG | 4 | 104956 | 104977 | 22 | 33.33 % | 50 % | 16.67 % | 0 % | 9 % | 31319972 |
| 11 | NC_014676 | TATTAG | 5 | 104978 | 105010 | 33 | 33.33 % | 50 % | 16.67 % | 0 % | 9 % | 31319972 |
| 12 | NC_014676 | AGAAAT | 3 | 114855 | 114873 | 19 | 66.67 % | 16.67 % | 16.67 % | 0 % | 10 % | 31319972 |
| 13 | NC_014676 | TTAGAA | 3 | 118865 | 118883 | 19 | 50 % | 33.33 % | 16.67 % | 0 % | 10 % | 31319972 |
| 14 | NC_014676 | ACTAAT | 10 | 144942 | 144996 | 55 | 50 % | 33.33 % | 0 % | 16.67 % | 9 % | 31319972 |
| 15 | NC_014676 | CTCCTT | 3 | 152151 | 152168 | 18 | 0 % | 50 % | 0 % | 50 % | 5 % | 34224021 |